Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g0838 ATGGATTCTCTCAACGCTCTCTTTCTCCTTCTTGCTTTCCTTTTACTGCTACAACTCAGAACCCGCCGGAGAAATCTGCCACCGAGCCCACCGTCTATTCCGATCGTCGGTCATCTCCACCTCCTACAACGCCCAACCCACCGGAACTTCCAAAACATCGCCGCCAAATACGGACCCATTTTCACTCTCCGATTCGGATCTCGCCTTGCTCTCATAGTCTCTTCACTCCAAATAGCACAAGAATGCTTCACCAAAAACGATGTCGTTTTCGCCAACCGCCCACGTTTACTCATCAGCCAATACCTTGGCTACAACTGCACCACCATGGCCACCGCCCCTTACGGAGACCACTGGCGGAACCTCCGTCGCCTCGCCACTGTGGAGATCTTCTCCACGGCTCGCCTGAACGCGTCTCTCTGCATTCGGAAGGATGAAATCTGGCGATTGTTGGTCAAACTCCATTCGGAATCGTTCGCTAAGGTGGAGTTGAAATCGATGTTTTCGGAACTGAGTTTCAACACCGTGATGAGGGTCGTGGCCGGAAAACGGTATTACGGCGAGGAGGTTTCCGATGAGGCGGAGGCGAGGGAGTTCAGAGAGCTTATGGAGGAGATTTCTCGCCATGGAGGAGCTTCTCAATGGATCGATTTCATGCCGATTTTGAAATGGATTGGATTTGACGGATATGAGAAGAGTTTGGCCAAATTGACGAAAAGGGCCGATCGATTTATGCAGGAATTGGTTGAAGAGCGGCGGAATAAGAAAGTGTTGGCAAAGGAAGAACAGAGTTCTCTGCTTCATCGGCTTCTTGAATTGCAGCTCTCTGAACCCGAATACTACACCGATCAGATCATCAAAGGGATCGTTCTGGTTCTATTGCGTGCAGGAACAGACACATCATCTGTGACCTTGGATTGGGCCATGACTCAACTACTCAACCATCCGGAGGTATTAGTTAAAGCCAAAGCTGAGATAGACACCAAGATTGGTCAAGATCGACCCCTTGAGGAAGCAGATCTCAACAACCTTAACTACCTTCAAGCTATAATTTCTGAGACCTTTCGATTGCACCCCGCAGCACCGATGCTCCTCTCGCACTATTCCTCTGACGACTGTACTGTCGCAGGCTACAACATTCCACGTGGGACGACGTTGTTGGTCAATGCTTGGGCAATTCATAGAGACCCGAAGCTGTGGGACGACCCGACGAGCTTCCGACCGGAGAGATTCTTGGGGGCAGGGAATGGGTTGCAGTCCAATAAACTCATTCCTTTTGGAATTGGAAGGAGGGCTTGTCCTGGGGAAACTATGGCTTTACGTTTTATAGGATTGACTTTGGGGCTATTGATTCAGTGTTATGAGTGGAAAAAGGCTGGAGGATGTGAAAAGGTTGACATGACTGAAGGTGGAGGTATCACCATTCATAAAGTTAAGCCTTTAGAAACTATGTGTAAAGCTCGTCCAATTATGGATAAAGTTCTATCAAATGGTTTGGACTAA 1500 48.87 MDSLNALFLLLAFLLLLQLRTRRRNLPPSPPSIPIVGHLHLLQRPTHRNFQNIAAKYGPIFTLRFGSRLALIVSSLQIAQECFTKNDVVFANRPRLLISQYLGYNCTTMATAPYGDHWRNLRRLATVEIFSTARLNASLCIRKDEIWRLLVKLHSESFAKVELKSMFSELSFNTVMRVVAGKRYYGEEVSDEAEAREFRELMEEISRHGGASQWIDFMPILKWIGFDGYEKSLAKLTKRADRFMQELVEERRNKKVLAKEEQSSLLHRLLELQLSEPEYYTDQIIKGIVLVLLRAGTDTSSVTLDWAMTQLLNHPEVLVKAKAEIDTKIGQDRPLEEADLNNLNYLQAIISETFRLHPAAPMLLSHYSSDDCTVAGYNIPRGTTLLVNAWAIHRDPKLWDDPTSFRPERFLGAGNGLQSNKLIPFGIGRRACPGETMALRFIGLTLGLLIQCYEWKKAGGCEKVDMTEGGGITIHKVKPLETMCKARPIMDKVLSNGLD 499
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 9941884 9944306 - CmPI595203_02g008380.1 Cmu02g0838 408887
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g0838 499 PRINTS P450 superfamily signature 295 312 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu02g0838 499 PRINTS P450 superfamily signature 432 443 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu02g0838 499 PRINTS P450 superfamily signature 348 359 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu02g0838 499 PRINTS P450 superfamily signature 423 432 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu02g0838 499 Gene3D Cytochrome P450 19 494 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu02g0838 499 SUPERFAMILY Cytochrome P450 27 487 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu02g0838 499 Pfam Cytochrome P450 27 476 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu02g0838 499 FunFam Cytochrome P450 family protein 18 490 - -
Cmu02g0838 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 425 434 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cmu02g0838 499 CDD CYP81 58 480 - -
Cmu02g0838 499 Coils Coil 226 260 - -
Cmu02g0838 499 PRINTS E-class P450 group I signature 304 330 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu02g0838 499 PRINTS E-class P450 group I signature 170 188 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu02g0838 499 PRINTS E-class P450 group I signature 284 301 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu02g0838 499 PRINTS E-class P450 group I signature 388 412 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu02g0838 499 PRINTS E-class P450 group I signature 54 73 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu02g0838 499 PRINTS E-class P450 group I signature 78 99 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu02g0838 499 PRINTS E-class P450 group I signature 347 365 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu02g0838 499 PRINTS E-class P450 group I signature 432 455 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu02g0838 499 PRINTS E-class P450 group I signature 422 432 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu02g0838 499 PANTHER CYTOCHROME P450 82C3-RELATED 8 487 IPR050651 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g1666 Cmu-Chr1:30392562 Cmu02g0838 Cmu-Chr2:9941884 1.00E-166 dispersed
Cmu02g0838 Cmu-Chr2:9941884 Cmu06g0151 Cmu-Chr6:1548788 3.40E-154 dispersed
Cmu02g0837 Cmu-Chr2:9923555 Cmu02g0838 Cmu-Chr2:9941884 1.30E-238 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g0838 K13260 - csv:101210967 801.201