Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g0861 ATGAGAATGGGGAGGCTTACTTCTTTGGTGTTGGCCACTATAGTTGGTCTTCTAGCCCTGATAGGCTCCACTCAAGCTCAGTTGCAGCTTGGTTTCTATGCCAAAAGCTGCCCAAACGCTGAGAAGATTGTGCTGGATTTCGTTCACCAGCATATCCACAATGCCCCTTCACTGGCAGCAACTTTCATTAGAATGCACTTCCATGATTGCTTTGTCAGGGGTTGTGATGGATCTGTGCTTATAAACTCCACCTCAAATAACCAAGCTGAGAAGGATTCTCAACCAAATCAAACACTCAGAGGTTTTGACTTCATTGATAGAGTCAAAAGCTTACTTGAAGCTGAATGCCCTGGAGTGGTCTCTTGCGCAGATGTTCTTTCCTTGGTTGCAAGAGATACCATTGTAGCCACAGGAGGTCCATACTGGGAAGTTCCAACTGGCCGAAGGGATGGAGTAATCTCAAGATCATCAGAAGCCTTGAATAACATTCCTCCTCCATTTGGGAACTTTTCCACACTTCAAAGGCTTTTCGCGAACCAAGGCCTTGATCTAAAAGACTTGGTGTTACTATCTGGCGCTCACACAATCGGTATCGCACACTGCTCATCATTCAGAAACCGACTCTACAATTTCACCGGCGTCGGAGACCAAGATCCCTCTCTGGACCCAAGATACGCCGCTAATCTGAAGGCCAACAAATGCAAAACTCCGACCGACAACAGCAAAGTGGAAATGGACCCTGGAAGTCGCAACACTTTTGACCTTAGCTACTATTCTCTTCTACTAAAAAGGAGGGGCCTCTTCGAATCCGATGCTGCTCTCACTACAGACGCAACTACATTGGGTTTAGTTCAGAAACTGGTACAAGGACCCATTGAAGAATTCTTCGCTGAATTTGCAGCATCCATGGAGAAAATGGGTCGGATTAAAGTGAAGACTGGAACTGAAGGTGAAATCAGAAGGAGATGCGCTGTGGTGAATAGTTGA 987 46.1 MRMGRLTSLVLATIVGLLALIGSTQAQLQLGFYAKSCPNAEKIVLDFVHQHIHNAPSLAATFIRMHFHDCFVRGCDGSVLINSTSNNQAEKDSQPNQTLRGFDFIDRVKSLLEAECPGVVSCADVLSLVARDTIVATGGPYWEVPTGRRDGVISRSSEALNNIPPPFGNFSTLQRLFANQGLDLKDLVLLSGAHTIGIAHCSSFRNRLYNFTGVGDQDPSLDPRYAANLKANKCKTPTDNSKVEMDPGSRNTFDLSYYSLLLKRRGLFESDAALTTDATTLGLVQKLVQGPIEEFFAEFAASMEKMGRIKVKTGTEGEIRRRCAVVNS 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10451928 10453249 - CmPI595203_02g008610.1 Cmu02g0861 408910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g0861 328 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0861 328 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0861 328 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0861 328 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0861 328 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0861 328 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0861 328 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0861 328 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0861 328 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0861 328 FunFam Peroxidase 31 171 - -
Cmu02g0861 328 Gene3D - 31 327 - -
Cmu02g0861 328 CDD secretory_peroxidase 27 326 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cmu02g0861 328 FunFam Peroxidase 164 306 - -
Cmu02g0861 328 ProSiteProfiles Plant heme peroxidase family profile. 27 327 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0861 328 Gene3D Peroxidase, domain 2 164 306 - -
Cmu02g0861 328 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0861 328 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0861 328 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0861 328 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0861 328 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0861 328 PANTHER PEROXIDASE 25-RELATED 22 323 IPR000823 GO:0004601(InterPro)|GO:0004601(PANTHER)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Cmu02g0861 328 SUPERFAMILY Heme-dependent peroxidases 27 327 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0861 328 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601(InterPro)
Cmu02g0861 328 Pfam Peroxidase 46 288 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0861 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g0180 Cmu-Chr2:1718272 Cmu02g0861 Cmu-Chr2:10451928 2.00E-91 dispersed
Cmu02g0181 Cmu-Chr2:1726103 Cmu02g0861 Cmu-Chr2:10451928 7.80E-85 dispersed
Cmu02g0861 Cmu-Chr2:10451928 Cmu06g0540 Cmu-Chr6:5979064 1.10E-79 dispersed
Cmu02g0179 Cmu-Chr2:1703988 Cmu02g0861 Cmu-Chr2:10451928 4.90E-124 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g0861 K00430 - csv:101213629 612.453