Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu02g1051 | ATGGATGGATTTAGGAGTAACGACAACAAACAAGGCGTTGAAAGGCATTCCCGTGCCGAGATGGGGTCATTAGGCGAGAAAACCATACTGGAATTTGAAGATGAGAGCCTTGTTAGTCCTGTATCATTAAATAGAAAGAACTTTTCTATTGAGGGATCTATCCATAGTTCTACGTTGGGTGGTGGTTCGCAGAAACTTAGTTACAGTAACATGAAGAACAGGGTATTTGGCAGCATTAAGATTGTCGTCTTCTCTGCTAAAATAAACCTTCTCATGCCTTTTGGGCCTTTAGCAATAATAGTCAGCACGTTATCTGGTCACCATGGTTGGGTCTTCCTTTTAAGCTTGTTGGGGATCATACCTCTTGCTGAGCGTTTGGGATATGCAACTGAACAACTGGCATGCTATACTGGAGCCACAGTTGGAGGTCTTCTGAATGCTACTTTTGGAAATGCTACAGAATTGATAATATCAATATATGCATTGCGAAGAGGAATGATCCGTGTTGTTCAACAGTCATTATTAGGTTCAATTTTGTCTAATATGTTATTAGTACTTGGATGTGCCTTCTTTGCTGGTGGAGTTGTGGTTTCTAAGAGAGAGCAGGTCTTCAGTAAGGCAGCTGCTACAGTGAATTCTGGATTGCTGTTAATGGCGGTAATGGGACTTCTATTTCCTGCTGTCCTTCGTTCGACACACACAGAGTTGCACTCTGGAAAGTCAGAGTTGGCTCTTTCAAGATTTAGTAGCGGCATTATGTTGGTTGCATATGCTGCCTATCTTGTTTTTCAGTTGAAAAGTGATAAGAACTTATATCTCCCGGTTGACGAGGGGGATAATGAAGGGAGTTCTTCTGATGATGAAGAAGCTCCTGAGATTACCATGTGGGAATCCATTATTTGGCTGTCTATCTTGACCATTTGGATCTCCGTCCTCTCTGAATACTTGGTTAATGCAATCGAGGGGGCATCGGTTGCAATGAACATACCAGTAGCATTCATTAGTGTTATCCTACTACCTATTGTTGGGAATGCTGCAGAGCATGCAGGTGCCATCATGTTTGCCATGAAAGACAAGCTTGACATTTCTTTGGGAGTCGCAATAGGATCATCGACACAGATATCTATGTTTGGGATTCCTTTTTGTGTGGTCATTGGTTGGATCATGGGATGTCCTATGGACTTGAATTTTCAGCTTTTTGAAACCGCCACGCTTTTCATCACGGTCATTGTTGTGGCCTTCATGTTGCAGGATGGAACTTCTAATTACCTCAAAGGACTAATGCTTATTCTCTGCTACCTGATAGTAGCTGCGAGTTTCTTTGTACATATTGACCCAGCATCAGTTGGTAAGCTTTCACTCCCTTTGCTACAACTGGGAAACTGCAAACAAAATGGAAGCTATTCAATGCCCTACAAAACTAACAGTCTAACCATGAAAATCAAAACTTTTACACAGGAGACAAGACCCGAAAACCTGGTGTATGAAAGGCAAGGGACGACTCAAAGAAGTGAATCTGCCTGCACTAGTACTCTCTTGAAGATGGGATTGACCGAAGCTCGAGGTTCACTCCATTGCTGTATAGTTCTGAATTCAGGCTACAACCTTGTTCAGAAATCATTTTTCCATGTTTTGGGACAACCAATGGCAATAGATGTTTCCTTGATTCTTCCAGTCGTTGGTGCTGATCTTGTTTTATCATTGCAAGCTTTGGCAAATACTCACAACTTAGCAACTAGGAATGCTAGATATTGA | 1755 | 41.94 | MDGFRSNDNKQGVERHSRAEMGSLGEKTILEFEDESLVSPVSLNRKNFSIEGSIHSSTLGGGSQKLSYSNMKNRVFGSIKIVVFSAKINLLMPFGPLAIIVSTLSGHHGWVFLLSLLGIIPLAERLGYATEQLACYTGATVGGLLNATFGNATELIISIYALRRGMIRVVQQSLLGSILSNMLLVLGCAFFAGGVVVSKREQVFSKAAATVNSGLLLMAVMGLLFPAVLRSTHTELHSGKSELALSRFSSGIMLVAYAAYLVFQLKSDKNLYLPVDEGDNEGSSSDDEEAPEITMWESIIWLSILTIWISVLSEYLVNAIEGASVAMNIPVAFISVILLPIVGNAAEHAGAIMFAMKDKLDISLGVAIGSSTQISMFGIPFCVVIGWIMGCPMDLNFQLFETATLFITVIVVAFMLQDGTSNYLKGLMLILCYLIVAASFFVHIDPASVGKLSLPLLQLGNCKQNGSYSMPYKTNSLTMKIKTFTQETRPENLVYERQGTTQRSESACTSTLLKMGLTEARGSLHCCIVLNSGYNLVQKSFFHVLGQPMAIDVSLILPVVGADLVLSLQALANTHNLATRNARY | 584 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 20128803 | 20133606 | + | CmPI595203_02g010510.1 | Cmu02g1051 | 409100 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu02g1051 | 584 | Pfam | Sodium/calcium exchanger protein | 109 | 265 | IPR004837 | GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cmu02g1051 | 584 | Pfam | Sodium/calcium exchanger protein | 298 | 440 | IPR004837 | GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cmu02g1051 | 584 | NCBIfam | calcium/proton exchanger | 92 | 441 | IPR004798 | GO:0006816(InterPro)|GO:0015369(InterPro) | |
Cmu02g1051 | 584 | Gene3D | - | 283 | 442 | IPR044880 | - | |
Cmu02g1051 | 584 | Gene3D | - | 138 | 278 | IPR044880 | - | |
Cmu02g1051 | 584 | FunFam | Vacuolar cation/proton exchanger | 286 | 442 | - | - | |
Cmu02g1051 | 584 | FunFam | Vacuolar cation/proton exchanger | 139 | 278 | - | - | |
Cmu02g1051 | 584 | PANTHER | VACUOLAR CALCIUM ION TRANSPORTER | 64 | 446 | IPR004713 | GO:0006812(InterPro)|GO:0006874(PANTHER)|GO:0008324(InterPro)|GO:0009705(PANTHER)|GO:0015369(PANTHER)|GO:0016020(InterPro)|GO:0070588(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu02g1051 | Cmu-Chr2:20128803 | Cmu10g1232 | Cmu-Chr10:5181265 | 3.50E-158 | dispersed | |
Cmu02g1051 | Cmu-Chr2:20128803 | Cmu04g0749 | Cmu-Chr4:21996549 | 1.40E-93 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu02g1051 | K07300 | - | csv:101215915 | 835.484 |