Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g1051 ATGGATGGATTTAGGAGTAACGACAACAAACAAGGCGTTGAAAGGCATTCCCGTGCCGAGATGGGGTCATTAGGCGAGAAAACCATACTGGAATTTGAAGATGAGAGCCTTGTTAGTCCTGTATCATTAAATAGAAAGAACTTTTCTATTGAGGGATCTATCCATAGTTCTACGTTGGGTGGTGGTTCGCAGAAACTTAGTTACAGTAACATGAAGAACAGGGTATTTGGCAGCATTAAGATTGTCGTCTTCTCTGCTAAAATAAACCTTCTCATGCCTTTTGGGCCTTTAGCAATAATAGTCAGCACGTTATCTGGTCACCATGGTTGGGTCTTCCTTTTAAGCTTGTTGGGGATCATACCTCTTGCTGAGCGTTTGGGATATGCAACTGAACAACTGGCATGCTATACTGGAGCCACAGTTGGAGGTCTTCTGAATGCTACTTTTGGAAATGCTACAGAATTGATAATATCAATATATGCATTGCGAAGAGGAATGATCCGTGTTGTTCAACAGTCATTATTAGGTTCAATTTTGTCTAATATGTTATTAGTACTTGGATGTGCCTTCTTTGCTGGTGGAGTTGTGGTTTCTAAGAGAGAGCAGGTCTTCAGTAAGGCAGCTGCTACAGTGAATTCTGGATTGCTGTTAATGGCGGTAATGGGACTTCTATTTCCTGCTGTCCTTCGTTCGACACACACAGAGTTGCACTCTGGAAAGTCAGAGTTGGCTCTTTCAAGATTTAGTAGCGGCATTATGTTGGTTGCATATGCTGCCTATCTTGTTTTTCAGTTGAAAAGTGATAAGAACTTATATCTCCCGGTTGACGAGGGGGATAATGAAGGGAGTTCTTCTGATGATGAAGAAGCTCCTGAGATTACCATGTGGGAATCCATTATTTGGCTGTCTATCTTGACCATTTGGATCTCCGTCCTCTCTGAATACTTGGTTAATGCAATCGAGGGGGCATCGGTTGCAATGAACATACCAGTAGCATTCATTAGTGTTATCCTACTACCTATTGTTGGGAATGCTGCAGAGCATGCAGGTGCCATCATGTTTGCCATGAAAGACAAGCTTGACATTTCTTTGGGAGTCGCAATAGGATCATCGACACAGATATCTATGTTTGGGATTCCTTTTTGTGTGGTCATTGGTTGGATCATGGGATGTCCTATGGACTTGAATTTTCAGCTTTTTGAAACCGCCACGCTTTTCATCACGGTCATTGTTGTGGCCTTCATGTTGCAGGATGGAACTTCTAATTACCTCAAAGGACTAATGCTTATTCTCTGCTACCTGATAGTAGCTGCGAGTTTCTTTGTACATATTGACCCAGCATCAGTTGGTAAGCTTTCACTCCCTTTGCTACAACTGGGAAACTGCAAACAAAATGGAAGCTATTCAATGCCCTACAAAACTAACAGTCTAACCATGAAAATCAAAACTTTTACACAGGAGACAAGACCCGAAAACCTGGTGTATGAAAGGCAAGGGACGACTCAAAGAAGTGAATCTGCCTGCACTAGTACTCTCTTGAAGATGGGATTGACCGAAGCTCGAGGTTCACTCCATTGCTGTATAGTTCTGAATTCAGGCTACAACCTTGTTCAGAAATCATTTTTCCATGTTTTGGGACAACCAATGGCAATAGATGTTTCCTTGATTCTTCCAGTCGTTGGTGCTGATCTTGTTTTATCATTGCAAGCTTTGGCAAATACTCACAACTTAGCAACTAGGAATGCTAGATATTGA 1755 41.94 MDGFRSNDNKQGVERHSRAEMGSLGEKTILEFEDESLVSPVSLNRKNFSIEGSIHSSTLGGGSQKLSYSNMKNRVFGSIKIVVFSAKINLLMPFGPLAIIVSTLSGHHGWVFLLSLLGIIPLAERLGYATEQLACYTGATVGGLLNATFGNATELIISIYALRRGMIRVVQQSLLGSILSNMLLVLGCAFFAGGVVVSKREQVFSKAAATVNSGLLLMAVMGLLFPAVLRSTHTELHSGKSELALSRFSSGIMLVAYAAYLVFQLKSDKNLYLPVDEGDNEGSSSDDEEAPEITMWESIIWLSILTIWISVLSEYLVNAIEGASVAMNIPVAFISVILLPIVGNAAEHAGAIMFAMKDKLDISLGVAIGSSTQISMFGIPFCVVIGWIMGCPMDLNFQLFETATLFITVIVVAFMLQDGTSNYLKGLMLILCYLIVAASFFVHIDPASVGKLSLPLLQLGNCKQNGSYSMPYKTNSLTMKIKTFTQETRPENLVYERQGTTQRSESACTSTLLKMGLTEARGSLHCCIVLNSGYNLVQKSFFHVLGQPMAIDVSLILPVVGADLVLSLQALANTHNLATRNARY 584
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 20128803 20133606 + CmPI595203_02g010510.1 Cmu02g1051 409100
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g1051 584 Pfam Sodium/calcium exchanger protein 109 265 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Cmu02g1051 584 Pfam Sodium/calcium exchanger protein 298 440 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Cmu02g1051 584 NCBIfam calcium/proton exchanger 92 441 IPR004798 GO:0006816(InterPro)|GO:0015369(InterPro)
Cmu02g1051 584 Gene3D - 283 442 IPR044880 -
Cmu02g1051 584 Gene3D - 138 278 IPR044880 -
Cmu02g1051 584 FunFam Vacuolar cation/proton exchanger 286 442 - -
Cmu02g1051 584 FunFam Vacuolar cation/proton exchanger 139 278 - -
Cmu02g1051 584 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 64 446 IPR004713 GO:0006812(InterPro)|GO:0006874(PANTHER)|GO:0008324(InterPro)|GO:0009705(PANTHER)|GO:0015369(PANTHER)|GO:0016020(InterPro)|GO:0070588(PANTHER)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g1051 Cmu-Chr2:20128803 Cmu10g1232 Cmu-Chr10:5181265 3.50E-158 dispersed
Cmu02g1051 Cmu-Chr2:20128803 Cmu04g0749 Cmu-Chr4:21996549 1.40E-93 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g1051 K07300 - csv:101215915 835.484