Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g1181 ATGGGTTCTTTGAAGCTGCCGCCTTCGACGACGGTGCTGAAATGGCTGGGGTTTGTCTCCGCCGTGTGGGTTCAGGCCATTTCCGGAAACAACTACACTTTTTCCAACTACTCCGACTCCCTCAAATCTCTGATGAATCTAACCCAACTTCAGCTCAATAATCTCTCCGTCGCTAAAGACGTCGGAAAAGCCTTCGGACTTCTCGCCGGAATCGCCTGTGACCGGTTTCCCACATGGGTGATCTTGCTTATTGGATCTCTTGAAGGTCTTCTTGGCTATGGCGCTCAGTGGCTTGTCGTTAGCCAAAGGATTTCTCCTCTTCCTTATTGGCAGATGTGCATCTTCTTGTGTTTGGGCGGAAACAGCACGACATGGATGAACACGGCGGTGCTAGTAACTTGCATCAGAAACTTCCGGAAGAATCGCGGCCCAGTTTCCGGCATTCTCAAAGGCTACGTCGGCCTCAGCACCGCCATTTTCACCGATCTCTGTACCGCTCTGTTTTCCTCCGACCCATCTTCTTTCCTCCTCATGCTCGCCTTTGTCCCCTTCGCCGTCTGTCTCTTCGCCATGTTCTTCCTCCGCGAAATCCCACCTCCAACCACCGCCGCCGATACCCAACAAGAATCCAATTACTTCTCCGTCTTCAACGCTCTCGCCGTCGTCGTCGCCGTCTATCTCTTATGCTTCGATTTCATCAAAAACTCCGGCAGGCTCTTCTCCCAAATATTCTCCATCGGGCTACTGATTCTCCTCGGATCCCCTTTGATCATCCCAATTTACACGTTTTTCAAGAGCTGGCACTCGAATCGAGCCGGATCGGATCTGGAAGCTCGAATTGAGGAGCCGCTACTGAAAGAAGAGGCAGTTGCGGCGCCGGTAAAGGAGGAAGCAGAGGAAATTGCAGAGGTAGAGCAGAGAGCGCCGGTGATCGGAGAAGAACACACGATTTTTGAAGCGGTGAGAACAATTGATTTCTGGGTGTTGTTCGTGTCGTTTCTGTGTGGAGTTGGAACGGGATTGGCGGTGATGAACAATATGGGTCAGATCGGATTGGCTCTGGGTTACGCCGATGTTTCAGTGTTCGTTTCTCTCACAAGTATTTGGGGATTTTTCGGCCGGATTCTTTCCGGAACACTTTCCGAGCATTTTCTCAAAAAAGTAGGCACACCAAGACCTCTATGGAACGCTGCATCTCAAATTCTAATGACCGTTGGATATGTTTTGATGGCCATGGCAATGCCAGGTTCTCTCTACATCGGCTCGGTCATCGTCGGGATCTGCTACGGCGTTCGTCTCTCTGTCACTGTCCCCACCGCCTCTGAGCTCTTCGGTCTCAAATACTACGGTCTCATCTACAACATTCTCATCCTCAACCTCCCAATCGGATCCTTCCTCTTCTCTGGCCTCCTTGCAGGGTTTCTCTACGACATGGAAGCGACCCCGACCGAGGGCGGCGGGAACACGTGCATCGGAGGGCATTGCTACAGAATTGTGTTTGTTGTGATGGCGTTGGCCTGTGTAATTGGGTTTGTTTTGGACATTTGGTTGGCATGTAGAACCAAAGAGCTTTATTCTAAGCTTAAAGCCAACAAGAAATCAAAGAAGGGAAACAACAATAACAACTCCTAG 1632 50.61 MGSLKLPPSTTVLKWLGFVSAVWVQAISGNNYTFSNYSDSLKSLMNLTQLQLNNLSVAKDVGKAFGLLAGIACDRFPTWVILLIGSLEGLLGYGAQWLVVSQRISPLPYWQMCIFLCLGGNSTTWMNTAVLVTCIRNFRKNRGPVSGILKGYVGLSTAIFTDLCTALFSSDPSSFLLMLAFVPFAVCLFAMFFLREIPPPTTAADTQQESNYFSVFNALAVVVAVYLLCFDFIKNSGRLFSQIFSIGLLILLGSPLIIPIYTFFKSWHSNRAGSDLEARIEEPLLKEEAVAAPVKEEAEEIAEVEQRAPVIGEEHTIFEAVRTIDFWVLFVSFLCGVGTGLAVMNNMGQIGLALGYADVSVFVSLTSIWGFFGRILSGTLSEHFLKKVGTPRPLWNAASQILMTVGYVLMAMAMPGSLYIGSVIVGICYGVRLSVTVPTASELFGLKYYGLIYNILILNLPIGSFLFSGLLAGFLYDMEATPTEGGGNTCIGGHCYRIVFVVMALACVIGFVLDIWLACRTKELYSKLKANKKSKKGNNNNNS 543
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 24473580 24477652 - CmPI595203_02g011810.1 Cmu02g1181 409230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g1181 543 Pfam Nodulin-like 14 260 IPR010658 -
Cmu02g1181 543 Gene3D MFS general substrate transporter like domains 284 540 IPR036259 -
Cmu02g1181 543 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 528 - GO:0016020(PANTHER)
Cmu02g1181 543 SUPERFAMILY MFS general substrate transporter 14 522 IPR036259 -
Cmu02g1181 543 Gene3D MFS general substrate transporter like domains 10 208 IPR036259 -
Cmu02g1181 543 CDD MFS_Mch1p_like 13 510 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g1181 Cmu-Chr2:24473580 Cmu03g0880 Cmu-Chr3:3268369 4.50E-83 dispersed
Cmu03g0645 Cmu-Chr3:691667 Cmu02g1181 Cmu-Chr2:24473580 1.10E-62 transposed
Cmu06g0062 Cmu-Chr6:585633 Cmu02g1181 Cmu-Chr2:24473580 1.50E-66 transposed
Cmu07g1108 Cmu-Chr7:26147221 Cmu02g1181 Cmu-Chr2:24473580 4.60E-70 transposed
Cmu07g1214 Cmu-Chr7:27467527 Cmu02g1181 Cmu-Chr2:24473580 1.50E-92 transposed
Cmu11g0775 Cmu-Chr11:8257824 Cmu02g1181 Cmu-Chr2:24473580 2.10E-86 transposed
Cmu02g0440 Cmu-Chr2:4035966 Cmu02g1181 Cmu-Chr2:24473580 6.30E-212 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g1181 - - - 0.0