Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g1208 ATGGGAGCTTCCATTCAAGTGTTAATTGCTATGCGGATATTTTGGAGGGTTGTTTGGGATGGTCTCCTATGGTACAAAGATAGTGGGCAGCATGCCAATGGTGAGTTTTCAATGGCTGTAGTTCAGGCTAACAATTTACTTGAGGATCAAAGCCAGATGGAGTCGGGCAATTTGAGCTTGCACGAGGCCGGGCCATATGGTACCTTTGTTGGTGTGTATGATGGGCATGGAGGGCCCGAGACATCTCGTTATGTAAATGATCACCTTTTCCAGCATCTTAAAAGGTTTACTTCAGAGCAACAATCCATGTCAGTGGATGTCATACGGAAGGCATTTCAAGCTACCGAAGAGGGGGTCATTGCTCAAGTTTCGAAACAATGGTCAATGAGGCCACAAATTGCAGCTGTTGGATCTTGCTGCCTTGTCGGTGTAATTTGTGGTGGAACCCTTTACATTGCTAACCTTGGTGATTCACGAGCTGTTTTAGGGAGAATTGTAAAGGCAACAGGGGAAGTTTTGTCTGTTCAGTTGTCAGCTGAGCATAATGCATCTATAGAGTCTGTGAGGCAGGAGCTCCGTGCCCTGCATCCTGATGATCCACATATTGTAGTCTTGAAGCATAATGTATGGCGCGTGAAGGGCCTTATACAGGTTTCTCGATCTATTGGTGATGTCTATTTAAAGAGAGCTGAGTTCAACCGAGAGCCTCTTTATGCTAAGTTCCGCCTTCGTGAACCCATCAAAAAACCCATACTGAGTGCTGAACCATCTATTTCAGTGCTCCAATTGCAGCCACAGGATCAATTTATTATATTTGCTTCAGATGGGCTCTGGGAACACCTTAGCAATCAGGAAGCTGTTGATATCGTCCAAAACCATCCACGTAATGGAAGTGCAAGAAGGCTGGTGAAAGCAGCACTGCAAGAGGCAGCAAAGAAGAGAGAAATGAGGTACTCTGATTTGAAGAAGATTGACCGTGGTGTACGGCGACATTTCCACGATGACATCACAGTGATTGTTGTGTTTCTCGACTCAAACCTTGTAGCTTCCAACAGAGATAAAGTGGAGACAGGCATCAATCCTTTTACTATACACTATACTGAAACTCATCAGATGAATACAGATAACATCTTCACAGAAGACAATACGGGTCAAATACGTCTTTTGAAGAGGTTTTGGGCTGGAGAGGATATTGTTTCCTTCAAACTTCTTCCTTTTCTGTTTATCAGAAAGAGTGAGCAAGCAATCAAGAACCTTCTTGAAAAGCCACATTTTTTTGTTGTTTTGAAGCAATCCCACCATTTTACTTGCAAGAAGATGAAATGGGGAGAAGAAGAAGCTGTTTCTGCTGCTTTAGCTTTGGCCAACAAAGAAATGGGTTGTGTTGCCTCAAAGTTAGAGGAAGAAGAAGAAGTAGTTTCCATTTGTAGAGAAAGAAAACGCCACTTAAAGTTAGCTGTTGAGAGAAGGTATGCTCTTGCAGAGGCACATTGTAAATATTGTCAAGCTTTATATGCTGTTTCAGCTGCCATTAAGCTATTTGTAGCTCGCCATTCTTCTCCTTCTCCTTTCCTCATTACATTCCCTCCTCCGTGTTCTCCTTCTCCTCCTCCTTCAGAAAAAGTTATAACCAATCCAATGTTTCTTCAGCAAATGCCTTCTGATTCCACCCATGAAGCCATACCTGCTTGCCCTTCATGTGTTTCTTCTTCTTCAACCTCTACAGAATCCTCCATTGAAGAAAGAGAAGAAGAATCAGTAGAAGACGAGAGGATTGAACAAGTCCCTCCATATTTCTACATGCAAATGCCACCCCCGATGCCATCTCCTCAGAGGGAGTTTGGATGGGATTTCTTCAATCCATTTGACACAATGAGGACCGATGTCATCGGCGAATATCGTGAGGACGAGCTCAGGATGGTGAGGGAGGAAGAAGGAATTCCAGAGCTGGAAGAGGCTGAGGTAGAGAAAGAAGAGCAAAACCAGAGAGTTGTGGCTGTTGCTGAGGAGGAAGACGTTGGAGCTTTTAAAGAGCAGAGGAATGGAGTTGAGATGGTTAAAGTTGGAGAGAAGGAAGATGAAGGTCAAATGAGGCAGAAAGGGCTAACAGTCATTGATACACCAGTGGAAGGAAGGGAACTTTTGGAAGCATTGCAAGATGTTGAGGATTATTTCATTAGGGCTTATGATTCTGGAATTGATGTTTCTAGGATGTTAGAGGCCAACAAAATTCAGCTTCAGTCTGGTTTAGAAGAAATAAAAGAGAACTCGACAAAACTCATCCAAGCAATAACTTGGCACCGGTCTGCTTCGGGCAAGCCTTCATCATGTAAGAGTCTAGTAGCATCAAGTTCGAAAGGTTCTTCAGCATGGACAGAGTTTAAAAATGAGCTGTTCGATGATTACGACATAATGGACTCAGGAAGCCATTCATCGACTCTCGGACGACTATATGCTTGGGAGAAGAAGCTCTACGAAGAGGTCAAGGCTGGGGACAGCATGCGCAAACTGTACGAGAAAAGGTGTTCACGACTAAGAAACCAGGACATTAAAGGGGATAATGGAGTTGCTACTGATAAAACTCGAGTTGCAGTAAAAGATTTATATGCCAGGATATTGGTCGCCATTCGGAGTGCTGAATCAATCTCGACGAGAATTGAGAAACTAAGAGACGACGAGCTACAACCTCAGATTGTCGAGCTGTTAAAAGGCTTAACAAGAACATGGAAAATCATGATGGAAGTTCATGAAACCCAGAAAAGGATTATCCTTGAAGTGAAGACTTATTCCTGCCATTCCTATCTGAAATTCTGTAACGAATCTCATCGTCTTGCAACTCTTCAGCTTGGGGCCGAGCTTCAGAATTGGCGTTCGTGTTTTTCAAAATACGTTGAATCACAAAAGGCTTATGTTGAAGCTCTCCATGGATGGCTGACCAAGTTTGTAGTGCCTGAGGTTGAGTTCTATTCTCGGGGTCGAGCGTCGGCTGTGCCTTATGGGCTGCACGGACCTCCATTGCTTTCAATCTGCCATGATTGGCTATCTTCCATGGAAAAGTTACCTGATAAACCAGTAGCCTTTGCATTGAAAAGCTTTGCAAAGGATATGAAAGCTCTATCAGATAAACAGATGGAGGAGCAGCACCAAAAGAGAAGAGTTGAAAGTCTCGGAAAGGAACTCGACCGAAGGATCCTGTCACTCCAGAAAACGGAGAACAAGTTCTTCGAGTTCAACTTTACCGAGATGAAATCAGAGCTGGAAATGGAAAATCAGAACGAGTACTTAACGGAAAAGAAAGATCAGCTGGACATGTTCAGGAAGAAGCTTGATTTGGAGAAGGAAAAACACAATAACTGCATTCAAGAAGCACAGAGTATTACATTAAATGGAATCCAAACAGGGTTTTCTGCAGTTTTTGAATCCTTATCAGAATTCTCCAAGGCATCCCAAATAATTTCTGAGACTCGAGGCACCATCAATGGCAGTTGCAAAGCTTTGTCTTCATGTATGCGGTTTGATTCCATTATTGTGGTGGGGCACGTGAAAACAGAGTCTGAAACTAGCAAAAAAACAAAAGATGTCTTTCATAATAATCCCCTCTGTATAATGCTGAGAGAGCGATGGAGTATCTCCAGAGGCCGTCCTGTATTACAGAAAGAGCTGAAGGATCTCGATAAGCCATTAGCCAATGGTCGCCACCTGACACTTGTCTTTCAACAACGGGGTACAGGAAGGCATTTGGAGGGTGGACCGTTCTTACCAAATAGCTTTAAGTGA 3777 43.39 MGASIQVLIAMRIFWRVVWDGLLWYKDSGQHANGEFSMAVVQANNLLEDQSQMESGNLSLHEAGPYGTFVGVYDGHGGPETSRYVNDHLFQHLKRFTSEQQSMSVDVIRKAFQATEEGVIAQVSKQWSMRPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRIVKATGEVLSVQLSAEHNASIESVRQELRALHPDDPHIVVLKHNVWRVKGLIQVSRSIGDVYLKRAEFNREPLYAKFRLREPIKKPILSAEPSISVLQLQPQDQFIIFASDGLWEHLSNQEAVDIVQNHPRNGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSNLVASNRDKVETGINPFTIHYTETHQMNTDNIFTEDNTGQIRLLKRFWAGEDIVSFKLLPFLFIRKSEQAIKNLLEKPHFFVVLKQSHHFTCKKMKWGEEEAVSAALALANKEMGCVASKLEEEEEVVSICRERKRHLKLAVERRYALAEAHCKYCQALYAVSAAIKLFVARHSSPSPFLITFPPPCSPSPPPSEKVITNPMFLQQMPSDSTHEAIPACPSCVSSSSTSTESSIEEREEESVEDERIEQVPPYFYMQMPPPMPSPQREFGWDFFNPFDTMRTDVIGEYREDELRMVREEEGIPELEEAEVEKEEQNQRVVAVAEEEDVGAFKEQRNGVEMVKVGEKEDEGQMRQKGLTVIDTPVEGRELLEALQDVEDYFIRAYDSGIDVSRMLEANKIQLQSGLEEIKENSTKLIQAITWHRSASGKPSSCKSLVASSSKGSSAWTEFKNELFDDYDIMDSGSHSSTLGRLYAWEKKLYEEVKAGDSMRKLYEKRCSRLRNQDIKGDNGVATDKTRVAVKDLYARILVAIRSAESISTRIEKLRDDELQPQIVELLKGLTRTWKIMMEVHETQKRIILEVKTYSCHSYLKFCNESHRLATLQLGAELQNWRSCFSKYVESQKAYVEALHGWLTKFVVPEVEFYSRGRASAVPYGLHGPPLLSICHDWLSSMEKLPDKPVAFALKSFAKDMKALSDKQMEEQHQKRRVESLGKELDRRILSLQKTENKFFEFNFTEMKSELEMENQNEYLTEKKDQLDMFRKKLDLEKEKHNNCIQEAQSITLNGIQTGFSAVFESLSEFSKASQIISETRGTINGSCKALSSCMRFDSIIVVGHVKTESETSKKTKDVFHNNPLCIMLRERWSISRGRPVLQKELKDLDKPLANGRHLTLVFQQRGTGRHLEGGPFLPNSFK 1258
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 24863102 24875513 + CmPI595203_02g012080.1 Cmu02g1208 409257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g1208 1258 ProSiteProfiles PPM-type phosphatase domain profile. 35 343 IPR001932 -
Cmu02g1208 1258 MobiDBLite consensus disorder prediction 559 576 - -
Cmu02g1208 1258 Pfam Protein phosphatase 2C 66 311 IPR001932 -
Cmu02g1208 1258 SUPERFAMILY PP2C-like 47 344 IPR036457 -
Cmu02g1208 1258 Pfam Protein of unknown function (DUF630) 459 518 IPR006868 -
Cmu02g1208 1258 PANTHER UNCHARACTERIZED 459 1149 - -
Cmu02g1208 1258 FunFam Phosphatase 2C family protein 24 353 - -
Cmu02g1208 1258 MobiDBLite consensus disorder prediction 559 590 - -
Cmu02g1208 1258 ProSitePatterns PPM-type phosphatase domain signature. 69 77 IPR000222 GO:0043169(InterPro)
Cmu02g1208 1258 Gene3D - 25 355 IPR036457 -
Cmu02g1208 1258 Pfam Protein of unknown function (DUF632) 714 1037 IPR006867 -
Cmu02g1208 1258 SMART PP2C_4 27 341 IPR001932 -
Cmu02g1208 1258 CDD PP2Cc 36 343 IPR001932 -
Cmu02g1208 1258 Coils Coil 650 670 - -
Cmu02g1208 1258 Coils Coil 1095 1115 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g1208 Cmu-Chr2:24863102 Cmu10g0895 Cmu-Chr10:994325 4.30E-153 dispersed
Cmu01g1986 Cmu-Chr1:33126122 Cmu02g1208 Cmu-Chr2:24863102 9.10E-51 transposed
Cmu02g0705 Cmu-Chr2:7231205 Cmu02g1208 Cmu-Chr2:24863102 1.50E-109 transposed
Cmu02g2397 Cmu-Chr2:37423818 Cmu02g1208 Cmu-Chr2:24863102 3.90E-58 transposed
Cmu06g0431 Cmu-Chr6:4920685 Cmu02g1208 Cmu-Chr2:24863102 7.40E-117 transposed
Cmu07g0956 Cmu-Chr7:24127222 Cmu02g1208 Cmu-Chr2:24863102 9.80E-62 transposed
Cmu11g1206 Cmu-Chr11:23548951 Cmu02g1208 Cmu-Chr2:24863102 5.60E-66 transposed
Cmu02g0415 Cmu-Chr2:3768399 Cmu02g1208 Cmu-Chr2:24863102 1.40E-158 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g1208 - - - 0.0