Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g1217 ATGGGAGGAAGTAGAAAATTGAGCTTTGTTGTGGTTTTTGTTATTGTTTTGACATCGTTGTTTGCGGTTGTTCCGACAGCCGAAGCACAGCTCCGACGAGATTTCTACGCAGATGTCTGCCCTAATGTGGAGTCCATAGTCCGACAGGCTGTAACCAAGAAGTTCAAACAAACATTCGTCACTGTTCCCGCTACCCTCCGCCTCTTCTTCCATGATTGCTTTGTTCAGGGTTGTGATGCGTCAGTGATGATTGCTTCAACTGGAGGTAACACCGCAGAGAAGGATCATCCTGACAATCTTTCATTGGCCGGAGATGGATTTGATACTGTCATCAAAGCCAAAGCGGCGGTTGACGCTGTGCCAGGTTGTAAGAATAAAGTCTCTTGCGCCGATATTCTCGTCATGGCTACTCGAGATGTCATTTCATTGGCTAGAGGTCCTTCTTATGCAGTGGAGCTAGGAAGAAAAGATGGGCTTGTTTCAAGGGCTTCAGATGTTGAAGGAAAATTGCCTCAACCAACCTTTAATCTCAATCAGCTCAATGCTATGTTTGCTGCCAATGGTCTTTCTCAAACTGATATGATTGCTCTTTCTGCTGCGCACACCGTAGGATTCTCTCACTGCAGCAAATTCGCAAATCGGATATACAATTTCAGCCGTACAAATGGAGTTGATCCAACGCTGAACGCCACATACGCAACCATGCTTCAAGGCATGTGCCCCAAAAACGTGGATCCAAGGATAGCCATAAACATGGATCCAAACACCCCCACTAGGTTCGACAATATGTACTTCAAGAATCTCCAACAAGGAATGGGCCTTTTCACTTCCGACCAAATTCTTTTCACTGATTCAAGGTCCAAGCCCACTGTCAAGATTTGGGCCCATAGTGGACAAACCTTCTACACGGCCTTCGTTGATGCCATGACCAAGTTGGGTCGGGTCGGAGTCAAGACCGGATCCAATGGCAACATCCGTACTGATTGTGGTGCTTTCAACTCTTGA 1005 46.57 MGGSRKLSFVVVFVIVLTSLFAVVPTAEAQLRRDFYADVCPNVESIVRQAVTKKFKQTFVTVPATLRLFFHDCFVQGCDASVMIASTGGNTAEKDHPDNLSLAGDGFDTVIKAKAAVDAVPGCKNKVSCADILVMATRDVISLARGPSYAVELGRKDGLVSRASDVEGKLPQPTFNLNQLNAMFAANGLSQTDMIALSAAHTVGFSHCSKFANRIYNFSRTNGVDPTLNATYATMLQGMCPKNVDPRIAINMDPNTPTRFDNMYFKNLQQGMGLFTSDQILFTDSRSKPTVKIWAHSGQTFYTAFVDAMTKLGRVGVKTGSNGNIRTDCGAFNS 334
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 25019444 25021713 + CmPI595203_02g012170.1 Cmu02g1217 409266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g1217 334 ProSitePatterns Peroxidases proximal heme-ligand signature. 193 203 IPR019793 -
Cmu02g1217 334 Gene3D - 34 333 - -
Cmu02g1217 334 PANTHER - 13 333 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1217 334 FunFam Peroxidase 171 312 - -
Cmu02g1217 334 ProSiteProfiles Plant heme peroxidase family profile. 30 333 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1217 334 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601(InterPro)
Cmu02g1217 334 FunFam Peroxidase 34 182 - -
Cmu02g1217 334 Pfam Peroxidase 47 296 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1217 334 CDD secretory_peroxidase 30 332 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cmu02g1217 334 SUPERFAMILY Heme-dependent peroxidases 30 333 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1217 334 PRINTS Haem peroxidase superfamily signature 253 268 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1217 334 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1217 334 PRINTS Haem peroxidase superfamily signature 127 144 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1217 334 PRINTS Haem peroxidase superfamily signature 145 157 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1217 334 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1217 334 PRINTS Plant peroxidase signature 267 284 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1217 334 PRINTS Plant peroxidase signature 145 160 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1217 334 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1217 334 PRINTS Plant peroxidase signature 251 266 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1217 334 PRINTS Plant peroxidase signature 126 136 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1217 334 PRINTS Plant peroxidase signature 192 204 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1217 334 PRINTS Plant peroxidase signature 307 320 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1217 334 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1217 334 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1217 334 Gene3D Peroxidase, domain 2 171 312 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g1691 Cmu-Chr1:30634460 Cmu02g1217 Cmu-Chr2:25019444 3.00E-143 dispersed
Cmu02g1217 Cmu-Chr2:25019444 Cmu11g0771 Cmu-Chr11:8195461 4.20E-116 dispersed
Cmu02g1217 Cmu-Chr2:25019444 Cmu09g1798 Cmu-Chr9:34143049 7.00E-79 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g1217 K00430 - csv:101208254 600.512