Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g1365 ATGGTATCTGAAACTTTGATGAAGATTGTATCACCTTGCTGGAAACCCTTGGTTGAAGGCGAAAATTCCAGTAGAGGTGGGGATGCAAGTGGTCGGGTTGACGGGCTGTTGTGGTACAAGGATTCTGGCCGCCATATTAATGGGGAATTCTCAATGGCAGTTATTCAGGCAAATAATTTGTTGGAAGATCGTAGCCAACTTGAGTCAGGACCACTGAGCTCATTTGAATCGGGTCCCGTTGGAACGTTTGTTGGAATTTATGATGGCCATGGAGGACCAGAAGCTGCAGAATTCATAAATGATCGTCTTTTCAATAATATGAAGACTTTTCATGGTGCAGAATTTATTCCAGAAAATCGGGGGGTATCTGCTGAAATTATTAATAAAGCATTCTTGGAGACGGAGGAGGAATTTTTGTCTCTTGTAAAGAAACAATGGCTTATGAAGCCTCAAATTGCTTCGGTTGGTTCATGCTGTTTGGTAGGCATAATATGTTGTGGATTACTGTATATTGCAAATGCTGGAGATTCTAGAGTGGTGTTGGGGAGATTTGAAAAAACTCATAAAGAGGTTAAAGCCATCCAATTGTCATCTGAGCACAATGCTAGTATTGAATCTGTGAGAGAGGAGCTGCACTCGTTGCATCCCAATGATCCACAGATTGTGGTGCTAAAGCACAAGGTGTGGCGCGTGAAGGGCGTTATACAGGTCTCAAGATCCCTTGGTGATGCTTATCTGAAGAAAACAGAGTTCAACCAAGAGCCTCTTTTGCCGAAGTTCAGACTACCAGAACCATTCCACAAGCCAATACTTAAAGCCGAGCCTGCTATTGTAGTGCAGAAACTGTACCCAGAGGATCAGTTTCTTATATTTGCTTCAGATGGTCTTTGGGAGTATATAAGCAATCAGGAAGCTGTCGACATCGTCCATAGTTGTCCACGTAACGGGGTTGCTAGGAAACTCGTTAAAGCCGCTCTTCATGAAGCTGCAAAGAAAAGAGAAATGAGATATACAGACTTGAAGAAGATTGACCGCGGGGTAAGAAGGCATTTTCACGACGACATCACTGTTATAGTTTTGTTCCTCGATTCACATCTGATTAGTCGCAGTCCAAGCTACGGACCAATGCTTTCAATCAGAGGAGGTTCTGGTATCCTCGCTAGATCATAG 1170 43.25 MVSETLMKIVSPCWKPLVEGENSSRGGDASGRVDGLLWYKDSGRHINGEFSMAVIQANNLLEDRSQLESGPLSSFESGPVGTFVGIYDGHGGPEAAEFINDRLFNNMKTFHGAEFIPENRGVSAEIINKAFLETEEEFLSLVKKQWLMKPQIASVGSCCLVGIICCGLLYIANAGDSRVVLGRFEKTHKEVKAIQLSSEHNASIESVREELHSLHPNDPQIVVLKHKVWRVKGVIQVSRSLGDAYLKKTEFNQEPLLPKFRLPEPFHKPILKAEPAIVVQKLYPEDQFLIFASDGLWEYISNQEAVDIVHSCPRNGVARKLVKAALHEAAKKREMRYTDLKKIDRGVRRHFHDDITVIVLFLDSHLISRSPSYGPMLSIRGGSGILARS 389
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 27213338 27216948 + CmPI595203_02g013650.1 Cmu02g1365 409414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g1365 389 Gene3D - 39 370 IPR036457 -
Cmu02g1365 389 ProSiteProfiles PPM-type phosphatase domain profile. 49 362 IPR001932 -
Cmu02g1365 389 Pfam Protein phosphatase 2C 81 331 IPR001932 -
Cmu02g1365 389 CDD PP2Cc 50 362 IPR001932 -
Cmu02g1365 389 PANTHER PROTEIN PHOSPHATASE 42 361 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cmu02g1365 389 SUPERFAMILY PP2C-like 58 363 IPR036457 -
Cmu02g1365 389 ProSitePatterns PPM-type phosphatase domain signature. 83 91 IPR000222 GO:0043169(InterPro)
Cmu02g1365 389 FunFam Phosphatase 2C family protein 38 372 - -
Cmu02g1365 389 SMART PP2C_4 41 360 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g1365 Cmu-Chr2:27213338 Cmu10g0895 Cmu-Chr10:994325 2.70E-138 dispersed
Cmu10g2790 Cmu-Chr10:34491879 Cmu02g1365 Cmu-Chr2:27213338 8.00E-149 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g1365 K01102 - csv:101220760 755.747