Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g1410 ATGTTTCTGGCTATGGCTTCTAGTTCTCGGTACTCGATCTTGCCTCCAATCTGCTCGGAGCTGCTGTCTTTTCATTTCTTAAAGAGGAATATGTCTCGGAAATCCCAGGTGATGGTTTCATTGCAACCCACCAAATCCATGCCAGTTAATTCTCGGTTCATGATTCCACAAGCTGCTGAAACTTTGGAAGAGCCTTATAATCGGAATGCGAAAACCATGGAAGCTAATTCGATAGTTGACAGTGAAAATGGTGCTGCTGGAGATGATGCTGTCAATGGACTCCAATGCAGTATGAACAATATTGATGAGCTGAATGAGGACTCACCATACAATTACAATATTACAACAGTGGAAGAAAGACCCACCATGGATGATGGAGAAGATGGTTTTATGCCTTTACCTTCACCTTCAATGTCGGCTTCACATAGCGAACGCAGGTGGGGTGACACATCCTCCTACACGCCAAGGAAGATACTTCAGTCTTGGTTTAAACTTCCAAATGGGAATTGGGATCTTGTCAAGATACTATCGACGACAGGAACAGAGTCAGTAGTTTCACTGACTGATGGAAAGGTGTTAAAGGTGAAAGCTGAAAGTTTGATTCCTGCAAATCCGGATATTCTTGATGGTGTTGATGATCTTATGCAACTTAGCTATTTAAATGAGCCTTCAGTATTATATGATCTTGAGTACAGATATAATCAAGATATTATATATACAAAAGCAGGACCAGTTCTGGTTGCTATCAATCCTTTTAAGAAAGTTGATTTGTATGGAAACGATTACATTGATGCATACAAGCGCAAAACAGTTGATAGCCCGCACGTATATGCCATTACCGATACAGCCATAAGAGAGATGATTCGAGATGAAGTAAATCAATCAATTATAATAAGCGGTGAAAGTGGAGCTGGGAAAACTGAAACAGCAAAGATAGCAATGCAATATTTGGCCGCTCTTGGTGGTGGAAGTGGAATAGAATATGAGATACTAAAGACCAATCCTATCTTAGAAGCTTTTGGAAATGCAAAAACATTGAGAAATGATAACTCAAGCCGTTTTGGAAAGTTGATAGAAATCCATTTTAGTGAAACTGGGAAAATATCTGGTGCAAATATTCAAACTTTTTTGCTTGAAAAGTCTAGAGTTGTCCAATGCACGGAGGGAGAGAGGTCATACCACATCTTTTATCAACTATGTAGTGGGGCTTCGCCTACACTTAAAGAGAAGCTAAACTTGAGAAGAGCGGAAGAGTACAAATATCTCTCCCAGAGCAGTTGTTTTTCAATAAGTAGAGTAAATGATGCCGAGGAGTTTCGTGTGGTCATGGAAGCACTAGATGTCGTCCATATCAGCAAAGAAGATCAGCACAGTGTATTTGCAATGCTTGCTGCTGTTCTATGGCTGGGAAATGTTTCCTTTAGTGTTATAGACAATGAGAATCATGTGGAGGCTGTGGAAGATGAAGGTTTACAGACTGTTGCTAAACTGATTGAGTGTGAGATTGAGGAGCTTAAACTAGCTTTATCAACTAGAAAAATGAGAGTTGGGAATGACAGCATTGTCCAAAAGCTTACTTTATCTCAGGCAATTGACACAAGAGATGCATTGGCAAAGTCAATTTACGCTTGTTTGTTTGAGTGGCTGGTCGAACAAATTAACAAATCTCTTTCTGTAGGCAAACGACGCACTGGCAGATCCATCAGCATTCTTGATATTTATGGCTTTGAATCGTTTGATAGAAATAGTTTTGAACAGTTCTGTATTAACTATGCGAACGAGAGACTACAGCAGCATTTCAATCGTCATTTATTTAAGCTAGAGCAGGAGGAATATATTCAAGATGGCATCGATTGGGCAAAAGTTGATTTTGACGACAACCAAGATTGTCTCAGTCTGTTTGAAAAGAAACCTTTGGGATTGTTGTCCCTGTTAGATGAGGAGTCTACTTTTCCAAACGGTACAGATCTGACCTTCGCGAACAAGCTTAAGCAGCATTTGGGTCCTAATTCTTCTTTTAGAGGAGAACGAGGGAAAGGCTTCACTGTCTATCATTATGCAGGAGAGGTCACTTACGACACAACTGGTTTTCTGGAGAAAAACAGGGACTTGCTACATTTAGATTCGATTCAACTCCTATCCTCATGCTCATGCCATCTCCCTCAGATTTTTGCATCCAACATGCTAACTCAATCGGAAAAGTCCATAGGTGGCACTTTACACAAGTCTGGTGGTGCAGAATCCCAAAAACTAAGTGTTGCAAGAAAGTTTAAGGGTCAATTATTCCAATTGATGCTCCGTCTTGAAAATACAACACCCCATTTTATCCGTTGCATCAAGCCCAACAACGTTCAGTCTCCCAGATTGTATGAGCAAGGACTTGTATTACAACAGTTAAGATGTTGTGGGGTCCTAGAAGTGGTACGAATATCACGAGCTGGTTTTCCTACCCGGATGTCACATCAGAAATTTGCTAGAAGGTATGGTTTCCTTCTACAAGAAAACATTGCATCACAGGATCCCCTAAGTGTCTCTGTCGCAATTCTTCATCAATTCAATATATTGCCTGAAATGTACCAAGTTGGCTATACAAAATTGTTTTTCCGAACTGGGCAGATTGGAGTGCTTGAAGATACAAGAAACCGCACCCTCCATGGGATTCTCTCTGTTCAAAGCTGTTATAGAGGGCATCTGGCTCGACGCCACCTCAAAGAGCTAAAGAGAGGGATTTCCGTGCTTCAGTCATTTGCACGTGGGGAGAAAGCAAGAAAAGAATATGCAATCTTGATGCAAAGACATAGGGCTGCTATTTCTATTCAAAAGTGTGTGAAAGCCAGAATTGCTAGTAAACGTTTGAAGAAAGTCTGTGATGCATCACTTACGATACAATCGGTTATCCGTGGCTGGTTGGTCAGGAGATGCTCAGGGGATATAGGTTTAATGAAACCTGGTGGCCTGACGGCAAATGGGTCAGGTGAGGTGCTTGTTAAGTCATCATTCCTTGCAGAATTACAACGCCGTGTCCTGAAGGCCGAGGCTGCTTTGCGAGAGAAAGAAGAGGAAAACGACATCCTCCATCAACGTCTCCAACAGTATGAGAACCGTTGGTCAGAGTATGAGCTGAAAATGAAGTCAATGGAAGAGGTGTGGCAGAGACAAATGAGATCCCTGCAGTCTAGCCTCTCCATTGCAAAGAAAAGCCTAGCAGTTGATGATTCAGAAAGAAATTCTGATGCATCGGTGAACGCAAGCGATGACAGAGGATACAGTTGGGAAGTGGGTAGCAACAACACAGCTAATGAAAGCAATGGAGTAAGACCAATGAATGCAGGTCTCAGCGTCATTAGCCGATTGGCTGAAGAATTCGAACAAAGAAGTCAAGTGTTTGGCGATGATGCAAAGTTCTTGGTAGAGGTAAAATCCGGTCAAGTTGAGGCAAGTCTTGACCCAGATAGGGAACTTAGAAGGTTGAAGCAAATGTTTGAAGCATGGAAGAAAGATTACGGGGGAAGGCTGCGCGAAACGAAAGTGATTTTGAATAAGCTTGGAAATGAAGGTGCCATGGATAGGGTGAAAAAGAAATGGTGGGGAAGAAGGAACAGCACAAGGTATAGTTAA 3618 41.71 MFLAMASSSRYSILPPICSELLSFHFLKRNMSRKSQVMVSLQPTKSMPVNSRFMIPQAAETLEEPYNRNAKTMEANSIVDSENGAAGDDAVNGLQCSMNNIDELNEDSPYNYNITTVEERPTMDDGEDGFMPLPSPSMSASHSERRWGDTSSYTPRKILQSWFKLPNGNWDLVKILSTTGTESVVSLTDGKVLKVKAESLIPANPDILDGVDDLMQLSYLNEPSVLYDLEYRYNQDIIYTKAGPVLVAINPFKKVDLYGNDYIDAYKRKTVDSPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCTEGERSYHIFYQLCSGASPTLKEKLNLRRAEEYKYLSQSSCFSISRVNDAEEFRVVMEALDVVHISKEDQHSVFAMLAAVLWLGNVSFSVIDNENHVEAVEDEGLQTVAKLIECEIEELKLALSTRKMRVGNDSIVQKLTLSQAIDTRDALAKSIYACLFEWLVEQINKSLSVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFDDNQDCLSLFEKKPLGLLSLLDEESTFPNGTDLTFANKLKQHLGPNSSFRGERGKGFTVYHYAGEVTYDTTGFLEKNRDLLHLDSIQLLSSCSCHLPQIFASNMLTQSEKSIGGTLHKSGGAESQKLSVARKFKGQLFQLMLRLENTTPHFIRCIKPNNVQSPRLYEQGLVLQQLRCCGVLEVVRISRAGFPTRMSHQKFARRYGFLLQENIASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRTGQIGVLEDTRNRTLHGILSVQSCYRGHLARRHLKELKRGISVLQSFARGEKARKEYAILMQRHRAAISIQKCVKARIASKRLKKVCDASLTIQSVIRGWLVRRCSGDIGLMKPGGLTANGSGEVLVKSSFLAELQRRVLKAEAALREKEEENDILHQRLQQYENRWSEYELKMKSMEEVWQRQMRSLQSSLSIAKKSLAVDDSERNSDASVNASDDRGYSWEVGSNNTANESNGVRPMNAGLSVISRLAEEFEQRSQVFGDDAKFLVEVKSGQVEASLDPDRELRRLKQMFEAWKKDYGGRLRETKVILNKLGNEGAMDRVKKKWWGRRNSTRYS 1205
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 27830108 27844125 + CmPI595203_02g014100.1 Cmu02g1410 409459
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g1410 1205 CDD MYSc_Myo8 223 869 IPR036022 -
Cmu02g1410 1205 MobiDBLite consensus disorder prediction 1072 1105 - -
Cmu02g1410 1205 MobiDBLite consensus disorder prediction 1089 1105 - -
Cmu02g1410 1205 Pfam IQ calmodulin-binding motif 888 904 IPR000048 GO:0005515(InterPro)
Cmu02g1410 1205 Pfam IQ calmodulin-binding motif 958 973 IPR000048 GO:0005515(InterPro)
Cmu02g1410 1205 Pfam IQ calmodulin-binding motif 908 926 IPR000048 GO:0005515(InterPro)
Cmu02g1410 1205 Pfam Myosin head (motor domain) 211 869 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cmu02g1410 1205 Gene3D - 815 882 - -
Cmu02g1410 1205 SMART iq_5 931 953 IPR000048 GO:0005515(InterPro)
Cmu02g1410 1205 SMART iq_5 882 904 IPR000048 GO:0005515(InterPro)
Cmu02g1410 1205 SMART iq_5 954 976 IPR000048 GO:0005515(InterPro)
Cmu02g1410 1205 SMART iq_5 905 927 IPR000048 GO:0005515(InterPro)
Cmu02g1410 1205 FunFam Unconventional myosin-XIX 579 771 - -
Cmu02g1410 1205 Gene3D - 391 447 - -
Cmu02g1410 1205 Gene3D - 579 771 - -
Cmu02g1410 1205 ProSiteProfiles Myosin motor domain profile. 209 881 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cmu02g1410 1205 ProSiteProfiles IQ motif profile. 885 911 - -
Cmu02g1410 1205 PANTHER MYOSIN 161 1195 - GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER)
Cmu02g1410 1205 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 156 205 IPR004009 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cmu02g1410 1205 FunFam Myosin heavy chain 391 447 - -
Cmu02g1410 1205 Gene3D Myosin VI head, motor domain, U50 subdomain 448 556 - -
Cmu02g1410 1205 Gene3D Kinesin motor domain 208 814 IPR036961 -
Cmu02g1410 1205 PRINTS Myosin heavy chain signature 620 648 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cmu02g1410 1205 PRINTS Myosin heavy chain signature 239 258 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cmu02g1410 1205 PRINTS Myosin heavy chain signature 293 318 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cmu02g1410 1205 PRINTS Myosin heavy chain signature 567 595 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cmu02g1410 1205 PRINTS Myosin heavy chain signature 335 362 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cmu02g1410 1205 ProSiteProfiles IQ motif profile. 906 935 - -
Cmu02g1410 1205 Gene3D - 934 975 - -
Cmu02g1410 1205 Gene3D - 887 933 - -
Cmu02g1410 1205 Coils Coil 1001 1049 - -
Cmu02g1410 1205 SMART MYSc_2a 203 882 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cmu02g1410 1205 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 930 IPR027417 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g1410 Cmu-Chr2:27830108 Cmu11g1838 Cmu-Chr11:30550965 6.50E-308 dispersed
Cmu02g1410 Cmu-Chr2:27830108 Cmu06g0131 Cmu-Chr6:1279213 5.70E-163 transposed
Cmu02g1410 Cmu-Chr2:27830108 Cmu05g0405 Cmu-Chr5:3425302 5.70E-163 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g1410 - - - 0.0