Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g1471 ATGGAAAAAGGAGATAATATTACAGCATTAATAGGGATGATTGTATTGCAAATATGCTATGCTGGTATAAATATTATCTCAAAGCTTGCCATGCAATCTGGAATGAACCCTCTTGTTCTTCTCACTTATAGACAGATTTTTGGCACTTTGGCCATTGCTCCTTTTGCCTTCTTTACTGAAAGGAAAACCAGGCCAAAGATTACTTTTACAGTTCTGATTCAAATCTTTGCGTGTTCCTTATCAGGAGCAACAGGAAACCAGATATTCTTCTTTGTTGGGTTGAAGTACACAAACCCAACAATTTCGAGTGCTATGGCCAATGTTCTTCCAGCTGCTACTTTTATTCTTGCTGTTCTTTTCAGACAAGAGAGTGTGAGAATCAAGACCAAGTCTGGTTTTGCAAAGGTAATAGGGACAATTGTGTGTGTATGTGGGGCAATGCTGCTGTCTTTCTACCATGGACACACCATTGACTTAGGTGAATCAAAAATTCACTGGCCATATGTTGAGAAAATGATCAAGGAAACAAACCCGGCCAACCATCAAGGAAACCGTGTCCTCGGCTCCATTTTGTTGCTCTTCAGCTCTTTTGCTTGGGCATTATGGTTTGTCATCCAAGCAAGATTGAGTGTGAAGTTCAAAGCTCCCTATACAAGTACTGCATTGTTGTGCTTCATGGCCTTTTTCCAATGTGGACTCATAGCTGTGATTTCAGAGCACAATATTGCTGCTTGGTCTTTGAAAAGTACGATCCGACTCGTTGCAGCTCTTTACGCGGGAGTTGTGTGCTCTGGATTGACATTTAGCATAACTTCATGGATTATACAAAGGAAAGGCCCTCTCTATGTCTCCATTTTCACCCCTTTATTGCTTATCATTGTGGCCATCGTTAGCTGGACTCTCCTCCATGAACAACTCTACGTGGGAACTGTTATTGGGTCTATTTTGATAATCATTGGGCTTTATGCTGTGCTATGGGGAAAATCCAAAGAGATGAAAGTAGAAGATGATCATGACAACATGGAAAAACCAAGAATAGAGAAGCCAAATGGAAATGGGAGTCATATTATTGAGGAGAAGGATGACATGGAATTGCAAATCACATACATCAAATAA 1116 40.41 MEKGDNITALIGMIVLQICYAGINIISKLAMQSGMNPLVLLTYRQIFGTLAIAPFAFFTERKTRPKITFTVLIQIFACSLSGATGNQIFFFVGLKYTNPTISSAMANVLPAATFILAVLFRQESVRIKTKSGFAKVIGTIVCVCGAMLLSFYHGHTIDLGESKIHWPYVEKMIKETNPANHQGNRVLGSILLLFSSFAWALWFVIQARLSVKFKAPYTSTALLCFMAFFQCGLIAVISEHNIAAWSLKSTIRLVAALYAGVVCSGLTFSITSWIIQRKGPLYVSIFTPLLLIIVAIVSWTLLHEQLYVGTVIGSILIIIGLYAVLWGKSKEMKVEDDHDNMEKPRIEKPNGNGSHIIEEKDDMELQITYIK 371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 28480547 28483658 + CmPI595203_02g014710.1 Cmu02g1471 409520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g1471 371 PANTHER WAT1-RELATED PROTEIN 12 338 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cmu02g1471 371 Pfam EamA-like transporter family 9 150 IPR000620 GO:0016020(InterPro)
Cmu02g1471 371 Pfam EamA-like transporter family 187 325 IPR000620 GO:0016020(InterPro)
Cmu02g1471 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 330 - -
Cmu02g1471 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 153 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g0401 Cmu-Chr1:4201932 Cmu02g1471 Cmu-Chr2:28480547 5.50E-34 dispersed
Cmu01g1043 Cmu-Chr1:16141714 Cmu02g1471 Cmu-Chr2:28480547 3.30E-117 dispersed
Cmu02g1471 Cmu-Chr2:28480547 Cmu10g2382 Cmu-Chr10:30243126 7.30E-69 dispersed
Cmu02g1471 Cmu-Chr2:28480547 Cmu04g0632 Cmu-Chr4:20118561 1.00E-70 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g1471 - - - 0.0