Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g1489 ATGGAATTTGAAGAAGCCTCTCTCTTGCAAAAAGTCTGTGCTCTTTACAACCAAATCTCAAGCCTCGCTAGCCTCGAGCCTTCAAAAAATGTCGACACTCTTTTCACTCAACTCGTCCTCACGTGCTCTCCACCTGCCCCTGGCCTTGATATTGCTTCTTTGTCTCAGCCACTTCAAGCCATGAGGGCTCATCTCATTCGCCTTTGTGCTAAAGCTGAAGCTCTTCTTGAACTTCATTTCTCTTCCATTTTGGCTTCCTCTTTTGATAATCCCATTTCTAACTTGTCTATCTTCCCTTACTACTCTAATTACTTGAAGCTCTCCCTTCTTGAGTTTGATATTCTTCGATCTCATTATCGTCGTGTCCCCGCTACCGTCGCGTTCCTTGGCTCTGGACCCCTCCCGCTCTCCTCCATTGTCTTGGCGTCTATTCATCTTAAGGGAACTATTTTCCACAACTTTGACATTGATCCAGCTGCAAACACCATGGCTAGTCAATTGGTTTGCTCTGACCCAGACTTATCACAAAGAATGATATTCCACACAACAGATGTAATGGAAGTGACAAAGGGATTAAAAGATTATGAAGTAGTTTTCTTAGCAGCATTGGTAGGATTAGAAGAGGAAGAAAAAGGAAGAGTTCTAAGGCATTTGGGGAAACATATGGCAGCTGGTGCTTATTTGATGCTAAGAAGTGCACATGGAGCTAGAGCATTTTTATATCCTGTTGTTGATATTTGTAACGTTGAAGCTTCTGGATTTGAGATTTTATCTGTGTTCCATCCCACTGATGAAGTTATAAACTCTGTTGTTATTGCAAGGAAGAAACTAGTGTTTGATCGAAACTCGATCGAGGATGAGGATGACGACGAGGACGACGAGAAGCAAGGTATATTAGTTAATACCTCATCTATTGTGTTGCCTGAGAAATGCTCTGGGTTTAATGGCTTTAGTCCCATGATTGAAGAGCAACTTTCTTGA 981 42.2 MEFEEASLLQKVCALYNQISSLASLEPSKNVDTLFTQLVLTCSPPAPGLDIASLSQPLQAMRAHLIRLCAKAEALLELHFSSILASSFDNPISNLSIFPYYSNYLKLSLLEFDILRSHYRRVPATVAFLGSGPLPLSSIVLASIHLKGTIFHNFDIDPAANTMASQLVCSDPDLSQRMIFHTTDVMEVTKGLKDYEVVFLAALVGLEEEEKGRVLRHLGKHMAAGAYLMLRSAHGARAFLYPVVDICNVEASGFEILSVFHPTDEVINSVVIARKKLVFDRNSIEDEDDDEDDEKQGILVNTSSIVLPEKCSGFNGFSPMIEEQLS 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 28649203 28650859 - CmPI595203_02g014890.1 Cmu02g1489 409538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g1489 326 Gene3D Vaccinia Virus protein VP39 9 276 IPR029063 -
Cmu02g1489 326 PANTHER NICOTIANAMINE SYNTHASE 3 4 283 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Cmu02g1489 326 Pfam Nicotianamine synthase protein 5 277 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Cmu02g1489 326 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 280 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g1489 Cmu-Chr2:28649203 Cmu06g1388 Cmu-Chr6:25039779 4.60E-67 dispersed
Cmu02g1489 Cmu-Chr2:28649203 Cmu02g1490 Cmu-Chr2:28663248 2.10E-80 tandem
Cmu02g1489 Cmu-Chr2:28649203 Cmu03g2355 Cmu-Chr3:32202274 1.70E-98 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g1489 K05953 - csv:101203651 548.895