Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g1490 ATGTGTTGCCAAGGTCTTCTTTTGGTTCAAAAAATCTCAGAACTTTACCACAAAATCTCCACTCTTGAAAGCCTCAAACCCTCTAAAGATGTCAACTCTCTCTTCTCTCAACTTGTTCTCATTTGCACCCCTCCCCCGTCTTCTCCGTCGTCCATCGACATCTCGGTGCTTTGCTCCGCCGTCCAAACCATGAGATCCCATCTCATCAAGCTCTGCGCCGAGGCCGAGGCACTTCTCGAGCATCACTACTCCACCATTTTAGCCTCTCACCAAAACCCACTTGACCATCTCTCCCTTTTCCCTTATTACTCCTACTATCTCAAACTAACCCACCTTGAATTCTCCATTTTGAACCACCACGCGCCCCACGCGCCACCCACCAAGGTGGCCTTTGTTGGCTCCGGTGCACTTCTGTTCTCGTCAATAATCATGGCCTCGAAGTACCTTCCAAAAACCGAGTTTCACAACTTCGACGTCGACTCGTCTGCCAATGCGAAAGCAGCAATGCTAGTAGCTGGCGATGCAGACTTGTCGAGGCGGATGGTGTTCCACACGACTAACATCATGGATGTTGTCTCAGACCAGTTGAGGAAATTTGAGGTAGTATTTTTGGCGGCGTTGGTGGGGATGGAGAGGGGAGAGAAGGTGAAAGTGATTGAGCATTTGAGGAAGAATATGGGAGGTGGCGCGTTGTTGATGTTGAGGAGCGCGTATGGTGCACGCGCGTTTCTTTATCCGGTGGTGGAAGCTTGTGATCTTCGAGGGTTTGAGATTCTTACAATGTTTCATCCCACGGATGAAGTTATTACTTCAATTGTGTTGGCACGATTATAA 834 48.92 MCCQGLLLVQKISELYHKISTLESLKPSKDVNSLFSQLVLICTPPPSSPSSIDISVLCSAVQTMRSHLIKLCAEAEALLEHHYSTILASHQNPLDHLSLFPYYSYYLKLTHLEFSILNHHAPHAPPTKVAFVGSGALLFSSIIMASKYLPKTEFHNFDVDSSANAKAAMLVAGDADLSRRMVFHTTNIMDVVSDQLRKFEVVFLAALVGMERGEKVKVIEHLRKNMGGGALLMLRSAYGARAFLYPVVEACDLRGFEILTMFHPTDEVITSIVLARL 277
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 28663248 28664081 - CmPI595203_02g014900.1 Cmu02g1490 409539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g1490 277 Pfam Nicotianamine synthase protein 7 276 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Cmu02g1490 277 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 277 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Cmu02g1490 277 PANTHER NICOTIANAMINE SYNTHASE 3 8 276 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Cmu02g1490 277 Gene3D Vaccinia Virus protein VP39 4 277 IPR029063 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g1490 Cmu-Chr2:28663248 Cmu03g2355 Cmu-Chr3:32202274 1.50E-79 dispersed
Cmu02g1489 Cmu-Chr2:28649203 Cmu02g1490 Cmu-Chr2:28663248 2.10E-80 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g1490 K05953 - csv:101219339 462.225