Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g1506 ATGTATACCCCTAACATGGCCAAAATTTTCAAAGGTTTTGTTCACAAAATTCAAGCTAAAGGAGAAAATCAGGATCGATCTACTGTCGACGTAGTACTATTATTTGCTGGAGCAAAAGGACACCATAAACCGCCGCCGGCCGGCGACCGGAGATTAGGGGCGTTGCGAGAATCGAACTCACGACCTCTCGCACCCGAAGCGAGAATCATACCACTAGACCAAACGCCCTTTAGGTCAAGGTTTTTTTGGGCAGCGATGGCTCATACCAGCAATACTGCAGCTGGAGTTGATAACACCTTTAGAAGGAAATTTGATCGGGAGGAGTATTTGGAACGAGCTCGTGAGCGTGAAAAACAGGAGGTTGAGAGGGTTAAGTCCAAATTGAAAGGTCCACCAGTGCAAAGAAAACCATTGAAACATAGAGATTACGAGGTAGACCTTGAGTCCCGATTGGGAAAAACCCAGGTTGTCACTCCAGTTGCACCTCTAAGCCAGCAGGCTGGATACTACTGTTCTGTTTGTGAATGTGTAGTCAAGGATTCCGCAAATTACTTGGATCATATCAATGGAAAGAAACATCAGAGAGCCTTGGGTATGTCCATGCGGGTAGAACGGGCATCTCTTGAACAGGTGCAGGAGCGGTTTGAAGTTCTTAAAAAGAGAAAAACGCCAGGAAGCTTCACAGAGCAAGATCTTGAAGAGCGTATACTAAAGCAACAACAAGAAGAAGAACAACGAAAGCGTGAGCGACGAGAAAGGAAGAAAGAAAAGAAGAAAGAGAAGGCTGCAGAAGAGGAACCTGAAGTAGATCCTGATGTTGCAGCAATGATGGGATTTGGAGGCTTCCGTTCATCAAAGAAGTGA 864 45.6 MYTPNMAKIFKGFVHKIQAKGENQDRSTVDVVLLFAGAKGHHKPPPAGDRRLGALRESNSRPLAPEARIIPLDQTPFRSRFFWAAMAHTSNTAAGVDNTFRRKFDREEYLERAREREKQEVERVKSKLKGPPVQRKPLKHRDYEVDLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERFEVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAAMMGFGGFRSSKK 287
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 28756253 28759070 - CmPI595203_02g015060.1 Cmu02g1506 409555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g1506 287 Gene3D Classic Zinc Finger 164 201 - -
Cmu02g1506 287 MobiDBLite consensus disorder prediction 222 268 - -
Cmu02g1506 287 Coils Coil 201 221 - -
Cmu02g1506 287 FunFam zinc finger matrin-type protein 2-like 163 201 - -
Cmu02g1506 287 Coils Coil 107 127 - -
Cmu02g1506 287 PANTHER ZINC FINGER MATRIN-TYPE PROTEIN 2 93 287 IPR040107 GO:0000398(InterPro)|GO:0000398(PANTHER)|GO:0005681(InterPro)|GO:0046540(PANTHER)
Cmu02g1506 287 Pfam Zinc-finger of C2H2 type 169 193 IPR013087 -
Cmu02g1506 287 Coils Coil 229 266 - -
Cmu02g1506 287 SUPERFAMILY beta-beta-alpha zinc fingers 165 210 IPR036236 -
Cmu02g1506 287 SMART ZnF_U1_5 166 200 IPR003604 GO:0003676(InterPro)|GO:0008270(InterPro)
Cmu02g1506 287 MobiDBLite consensus disorder prediction 222 287 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g1506 K12848 - csv:101206387 326.25