Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g1519 ATGTCGACGGAGAGATTGATTTCCAGTGGTACAACTCCGTCGGAAGCTGAGCCGCCGAAGTTGGCTTCAGCGTCGCACTCGTTCCGGCAATGTGGAGAACCGGCTAGGGTTTTTGAGGAGCTGCCAATTGCTTCCATTGTATCGGTTTCACGGCCCGATACTGGAGATATCAGTCCCTTGCTGTTATCTTATACCATTGAAATTCAATACAAGCAGTTTAAATGGAGCTTAGTGAAGAAAGCATCACAAGTTCTATATTTACATTTTGCATTGAAGAGACGTGCATTTATCAAAGAACTTCACGAGAAACAAGAGCAGGTGAAAGAATGGCTTCACAACTTGGGAATAGTAGACCATGCAACTGTAGTTCATCACGATGACGAATCTGATGATGGGGCTTTTTCTTTGCATGATGAACAAACTACAAGAAACAGGAATGTTCCTTCTGTTGCTGCTTTACCCATCATTAAGCCAGCACTGGGAGGACAGGGGTCCATTGCAGACAAGGCAAAGCTAGCAATGCAAGGTTACTTAAATCACTTTTTTGGGAACTTGGATATTGTAAATTCTCGTGAGGTCTGCAAATTTTTAGAAGTCTCGAAGATGTCATTTGTAAGAGAACACGGCCCAAAGTTGAAAGAAGGTTACCTAATGGTGAAGCATTTAAAACAGCTCACAGGATCTGATTCTAGTATAAAATGTTTTTCATGCCATTGGTGCAGCTGCTGCATGTACAATTGGAAAAAGGTTTGGGCTGTTTTGAAACCAGGTTTCTTTGCCTTGGTTGCTGATCCTATGGACACTAAACTTCTAGATATAATTGTTTTTGATGTGCTACCAACATTAGAAGAAAAGGAGGGATCCCAAGCATGCTTAGCATATCAAGTCAAGGAGCGCAATCCTTTACGTTATTCGTTTAAGGTTAGATGCGGAGATGGGGACGTGAGGTTCAGAACTACAAGTACCGCCAAAGTCAAAGAATGGGTCTCATCAATTAATGATGCTGGTTTTGGAACCAAAGATGGCTGGTGCCACCCTCATCGCTTTGGTTCTTTTGCTCCTCAGAGAGGTTTGAGTGATGATGAAAGCCAAGCTCAGTGGTTCATAGATGGCCGGGCAGCTTTTGAAGCAATCGCTTGCTCTATTGAGGCTGCAAAATCTGAGATATTCATCACTGGTTGGTGGCTTTGCCCTGAGCTTTACATGCGACGTCCTTTTCTCAATCATTCTTCATCACGGCTTGATGCATTGCTGGAAAAAAAGGCAAAAGAAGGTGTCAAGATTTACATCTTAATGTACAAGGAGGTTCCTATTGCTCTGAAAATTAACAGTATGTATGGTAAGAAGAGGCTTGTAAATATTCATGAGAACATTAAGGTACTACGTTCTCCTGATCATATGTCAACTGGAATTTACTATTGGTCACATCACGAAAAAATTGTCATCGTTGATCACCACATTTGCTTCATTGGAGGTTTGGATTTATGCTTTGGCCGCTATGATACAATGGAACATAAAGTGAATGATTTCCCTCCTCATATGTGGCCGGGAAAGGACTATTACAACCCAAGAGAATCTGAACCAAATTCTTGGGAAGACACAATGAAAGATGAATTGGAGCGGGAGAAGTGTCCTCGAATGCCATGGCATGATGTTCACTGTGCTCTTTGGGGATCTCCATGCCGTGATATTGCTCGACACTTTGTTCAGAGGTGGAACCATGCCAAGAGAAACAAAGCCCCAAATGAAGAAAAAATACCTCTACTTATGCCTCAACATGACATGGTCCTTCCACATTACATGGGAAGAAGCACGGAGTTGAGCTTAAAAAATAATGACTCGGAGCAAGATCACCAGAGGCAGACCACAGATGATTTCTTTTCCTCTTTATCACCACAGGAAGATATTCCATTACTGATGCCTCCAGAAATTGGTGGACTTCCAGATTCTAACGTGCAAACAAATAGTCTTTGCATGAATCACAATTTTTTCAATCAGCCAATGGAGATACGGAGTAGTGTTATGGATTCTTTCCAAGCATACAACGTTGAACCATTGACCCAATTTGAACAGACAAATGGATTGTTAGATGAATTTGGATTTTTGGATGAGTTTGGTTCTTTTGGTCATCTGAGGGAAGCTACTATTGATACTCCACCATATATGAAAACTTCAAATGATTGGTTGGAAACTGAACACGAAAGTAACCATGTTGTTGCTATAAACGAGGCCAAAGAAATTGGTCCACTTACTACTATCAATTGTCAGGTAATAAGAAGTGCCAGCCAGTGGTCAGCAGGAACAAGCAAACCAGAAGCAAGTATTCATGCTGCTTATTGTTCTGCCATTCAAGAGGCAAAACACTTCATCTACATTGAGAACCAGTTTTTCATATCAGGTTTATCAGGGGATGAGACCATACAAAATCGGGTTCTGGATGCACTATACCAACGTATATGGCTGGCTCATAAAGAAAAACAATGTTTTAGAGTTATTGTTGTTTTACCACTCTTACCTGGATTTCAGGGTGGTGTAGATGATAATGGTGCAGCAACTGTTCGAGCCTTGATGCATTGGCAGTACCGAACAATTAGTTGGGAAAAAACATCGATACTGTACCGTCTCAATCTTTTATTGGGTCCTAGAACACAAGATTATATTTTGTTTTGTGGCCTTCGATCATATGGCAGACTATTTGATGGTGGTCCAATTGCCACAAGTCAGGTATATGTGCATAGCAAATTGATGATAATTGATGATTGCATTACCTTTATTGGTTCCTCCAATATTAATGATAGAAGTTTACTTGGATCCAGAGATTCTGAGATTGGGGTAATTATTGAGGATAAAGAGTTTGTTGATTCATCTATGAATGGAAAACCTTGGAAAGCTGGAAAATTCGCCCATAGTCTACGATGCTCTTTGTGGTGTGAGCACCTCGGTCTTCATCTTGGAGAGGTCAGTCAAATCCTTGATCCTGTAGTAGAAGCAACATACAAAGATTTATGGTTAGCTACGGCAAAGGAAAACACAGCAATATATGAAGATGTTTTTTCTTGCATCCCCAGTGACAACATAATCTCAAGATCATCCTTGCGCCAAAGTTTGGCCGATTTGAAGGGCAAACTTGGTCATAACACACTAGATTTAGGAATAGCTGCTGAGAAGATAGAAAGCTGTGAAAATAGGGAAGTAAAGATGATAGATCCAATGGAGAGACTGAGGTGTATTAGGGGACATCTTGTCTGTTTTCCATTGAAGTTCTTGTGGCAAGAAGATCTCAGACCAGGGTTCATTGAGAAGGCGCGAATCGGTAGAGATCAGAGTACTTTTTGTAAGAAAGAGGATTGTACTGGATGGCTTCAGCTGCAATAA 3375 41.1 MSTERLISSGTTPSEAEPPKLASASHSFRQCGEPARVFEELPIASIVSVSRPDTGDISPLLLSYTIEIQYKQFKWSLVKKASQVLYLHFALKRRAFIKELHEKQEQVKEWLHNLGIVDHATVVHHDDESDDGAFSLHDEQTTRNRNVPSVAALPIIKPALGGQGSIADKAKLAMQGYLNHFFGNLDIVNSREVCKFLEVSKMSFVREHGPKLKEGYLMVKHLKQLTGSDSSIKCFSCHWCSCCMYNWKKVWAVLKPGFFALVADPMDTKLLDIIVFDVLPTLEEKEGSQACLAYQVKERNPLRYSFKVRCGDGDVRFRTTSTAKVKEWVSSINDAGFGTKDGWCHPHRFGSFAPQRGLSDDESQAQWFIDGRAAFEAIACSIEAAKSEIFITGWWLCPELYMRRPFLNHSSSRLDALLEKKAKEGVKIYILMYKEVPIALKINSMYGKKRLVNIHENIKVLRSPDHMSTGIYYWSHHEKIVIVDHHICFIGGLDLCFGRYDTMEHKVNDFPPHMWPGKDYYNPRESEPNSWEDTMKDELEREKCPRMPWHDVHCALWGSPCRDIARHFVQRWNHAKRNKAPNEEKIPLLMPQHDMVLPHYMGRSTELSLKNNDSEQDHQRQTTDDFFSSLSPQEDIPLLMPPEIGGLPDSNVQTNSLCMNHNFFNQPMEIRSSVMDSFQAYNVEPLTQFEQTNGLLDEFGFLDEFGSFGHLREATIDTPPYMKTSNDWLETEHESNHVVAINEAKEIGPLTTINCQVIRSASQWSAGTSKPEASIHAAYCSAIQEAKHFIYIENQFFISGLSGDETIQNRVLDALYQRIWLAHKEKQCFRVIVVLPLLPGFQGGVDDNGAATVRALMHWQYRTISWEKTSILYRLNLLLGPRTQDYILFCGLRSYGRLFDGGPIATSQVYVHSKLMIIDDCITFIGSSNINDRSLLGSRDSEIGVIIEDKEFVDSSMNGKPWKAGKFAHSLRCSLWCEHLGLHLGEVSQILDPVVEATYKDLWLATAKENTAIYEDVFSCIPSDNIISRSSLRQSLADLKGKLGHNTLDLGIAAEKIESCENREVKMIDPMERLRCIRGHLVCFPLKFLWQEDLRPGFIEKARIGRDQSTFCKKEDCTGWLQLQ 1124
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 28907060 28919948 - CmPI595203_02g015190.1 Cmu02g1519 409568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g1519 1124 SUPERFAMILY Phospholipase D/nuclease 747 955 - -
Cmu02g1519 1124 SMART pld_4 907 934 IPR001736 GO:0003824(InterPro)
Cmu02g1519 1124 SMART pld_4 472 499 IPR001736 GO:0003824(InterPro)
Cmu02g1519 1124 SUPERFAMILY PH domain-like 211 335 - -
Cmu02g1519 1124 CDD PLDc_vPLD1_2_yPLD_like_1 365 509 - -
Cmu02g1519 1124 Gene3D - 200 337 IPR011993 -
Cmu02g1519 1124 SMART PH_update 211 339 IPR001849 -
Cmu02g1519 1124 SUPERFAMILY Phospholipase D/nuclease 341 592 - -
Cmu02g1519 1124 Gene3D Endonuclease Chain A 357 600 - -
Cmu02g1519 1124 ProSiteProfiles PH domain profile. 210 337 IPR001849 -
Cmu02g1519 1124 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 907 934 IPR001736 GO:0003824(InterPro)
Cmu02g1519 1124 PANTHER PHOSPHOLIPASE D 191 1089 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
Cmu02g1519 1124 FunFam Phospholipase 741 961 - -
Cmu02g1519 1124 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 472 499 IPR001736 GO:0003824(InterPro)
Cmu02g1519 1124 CDD PLDc_vPLD1_2_yPLD_like_2 767 951 - -
Cmu02g1519 1124 Pfam PLD-like domain 909 954 IPR025202 -
Cmu02g1519 1124 MobiDBLite consensus disorder prediction 1 18 - -
Cmu02g1519 1124 Pfam Phospholipase D Active site motif 474 499 IPR001736 GO:0003824(InterPro)
Cmu02g1519 1124 CDD PH_PLD 188 335 - -
Cmu02g1519 1124 PIRSF PLD_euk 39 626 IPR016555 GO:0004630(InterPro)|GO:0006654(InterPro)|GO:0035556(InterPro)
Cmu02g1519 1124 PIRSF PLD_euk 715 1107 IPR016555 GO:0004630(InterPro)|GO:0006654(InterPro)|GO:0035556(InterPro)
Cmu02g1519 1124 MobiDBLite consensus disorder prediction 1 25 - -
Cmu02g1519 1124 Gene3D Endonuclease Chain A 721 968 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g1519 Cmu-Chr2:28907060 Cmu10g1179 Cmu-Chr10:4447374 3.40E-32 dispersed
Cmu02g1519 Cmu-Chr2:28907060 Cmu06g0476 Cmu-Chr6:5337298 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g1519 K01115 - csv:101220522 2103.18