Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g1688 ATGGAACCCAATGAAAACCAGCTCAGCTCCTACTTCCACCACCATCAACACCACCATCAGAGTCCCACCACATCGCCGACCAATGGCCTTTTACCACCCACCCACCACCTCTCCTCCGCCGCCGCCGCCTCCGACGCCGGCCCTCATGTCGTATACCCTCACTCTGTCCCTTCCGCCGCCGTGTCCTCGTCTCCTCTCGAGCCCGCACGCCGGAAGAGAGGCCGGCCGAGGAAGTACGGCACGCCGGAAGAAGCTTTAGCGGCTAAAAAAGCTGCTACGGCGTCGTCTCACTCTTCGTCCTCTAAGGCTAAGAAGGAACTCGCTTCTTCTTCTTCCCTTAATGCCGTTTCCGCTTCTTCTTCCTTCTCCGCGCCTTCCAAAAAATCTCAGTTGGCTGCACTTGGTAATGCAGGCCAAGGTTTTGCGCCACATGTTATTAATGTGGCAGCTGGTGAGGATGTGGGCCAGAAAATTATGATGTTTATGCAACAATGTAAGCGGGAAATTTGTATCCTTTCTGCATCTGGTTCAATCTCCAATGCATCTCTCCGTCAGCCAGCCGCATCCGGAGGCAATATTGCATATGAGGGTCGTTTTGAGATTGTTTCGTTATGCGGATCTTATGTACGAACTGACCTCGGGGGAAAGACGGGTGGTCTTAGTGTATGTCTATCAAGTGCTGAAGGCCACATCATAGGAGGGGGAGTTGGTGGACCGTTGAAGGCTGCTGGACCCGTGCAGGTTATTGTTGGAACCTTCGTAATCGACCCCAAGAAGGAAGTTGGTGGTGGTAAAGGCGATGCATCTGCTGGCAAGTTGTCCTCACCTATTGGTGGGACATCGATGTCAAATCTACGCTATGGCTCCAACATTGACTCGGGAGGTAATCATGTAAGGGGAAATGATGAACACCAAGGTCTTGGAGAGGGTCATTTTTTGCTTCAGCCCCGGGGAGTGAATCTGACATCACCGCGATCAACGGATTGGAGAACGGGTCTGGATGCCACAAACACTGCTTATGATTTGACAGGAAGAACAGGCCATCATTCTCCCGAAAACGGAGATTACGATCAGATTCCCGATTGA 1086 52.21 MEPNENQLSSYFHHHQHHHQSPTTSPTNGLLPPTHHLSSAAAASDAGPHVVYPHSVPSAAVSSSPLEPARRKRGRPRKYGTPEEALAAKKAATASSHSSSSKAKKELASSSSLNAVSASSSFSAPSKKSQLAALGNAGQGFAPHVINVAAGEDVGQKIMMFMQQCKREICILSASGSISNASLRQPAASGGNIAYEGRFEIVSLCGSYVRTDLGGKTGGLSVCLSSAEGHIIGGGVGGPLKAAGPVQVIVGTFVIDPKKEVGGGKGDASAGKLSSPIGGTSMSNLRYGSNIDSGGNHVRGNDEHQGLGEGHFLLQPRGVNLTSPRSTDWRTGLDATNTAYDLTGRTGHHSPENGDYDQIPD 361
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 30738360 30744334 - CmPI595203_02g016880.1 Cmu02g1688 409737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g1688 361 MobiDBLite consensus disorder prediction 319 333 - -
Cmu02g1688 361 Pfam Plants and Prokaryotes Conserved (PCC) domain 143 253 IPR005175 -
Cmu02g1688 361 Gene3D - 143 262 - -
Cmu02g1688 361 ProSiteProfiles PPC domain profile profile. 137 278 IPR005175 -
Cmu02g1688 361 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 36 268 IPR039605 GO:0003680(InterPro)
Cmu02g1688 361 CDD DUF296 143 253 IPR005175 -
Cmu02g1688 361 MobiDBLite consensus disorder prediction 314 333 - -
Cmu02g1688 361 MobiDBLite consensus disorder prediction 339 361 - -
Cmu02g1688 361 MobiDBLite consensus disorder prediction 1 105 - -
Cmu02g1688 361 SUPERFAMILY AF0104/ALDC/Ptd012-like 140 254 - -
Cmu02g1688 361 MobiDBLite consensus disorder prediction 288 309 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g1688 Cmu-Chr2:30738360 Cmu08g0870 Cmu-Chr8:20983940 9.10E-40 dispersed
Cmu02g1685 Cmu-Chr2:30704604 Cmu02g1688 Cmu-Chr2:30738360 2.90E-20 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g1688 - - - 0.0