Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g1730 ATGGGGAGCTGTTTGTCTACTGGCAATCAGAATAGTTGCAGAAGTGGAAGGAATGGAGAGAGAGTTTCTGGATCCTGTTTGGGAATTGGAGTTTGTGGCCGGATTGAAAGAAAGAGAACATTCTCAGATCATATTTTTTCTCTGCAGCATTTGAATTCTGTTTCTAATAGACTCGTTTATAATGGGAAGACTCGAAATTCTTGTATTTTCACTCAGCAGGGTCGAAAGGGTATAAACCAAGACGCTATGGTTGTATGGGAAGACTTCATATCAGATGGTGCAATTTTCTGTGGGGTATTTGATGGCCACGGTCCTCATGGTCATGTCGTTGCACGAAAAGTTAGAGATGTTCTGCCGAGAAAGCTAGTGTCATTCTGGCAGTCATCTCAGTTGAAGCATAATAGATCAGATAGAACTTCTTGTCTCCCGTGGAGTCAGAAGGATTCAGCAGATGGTGAAGGACAGAACATAGATGCCTCAGAGGAGGATAAATCAAGTTCTTTATGGAGAACAGCTTTCCTCAAATCATATAAAGCCATGGATAAGGAGCTCAAGTCTCATCCCAAATTGGACTGTTTCTGTAGTGGCAGTACCGCAGTTACCCTAGTGAAGCAGGGCTCAGATCTATTTGTGGGAAGTATCGGGGATTCTCGAGCGATTCTTGGATCTAAAGACAGCAGTGATTCCCTTGTAGCAACCCAGTTGACAGTAGATCTAAAGCCTGATTTACCCAGAGAAGCTGAAAGGATAAAGAAGTGTAAAGGAAGGGTATTTGCATTGCACGACGAGCCAGAAGTGCCAAGAGTGTGGCTGCCATTTGACAATGCACCTGGATTAGCAATGGCTCGAGCATTTGGCGACTTCTGTTTGAAGGACTATGGAGTTATCTCTATCCCTGAGTTCTCACACCGTGTGCTTACAAATAATGATTTGTTTGTTGTCCTTGCTTCAGATGGGGTTTGGGACGTATTGAGCAATGAAGAGGTGGTCGAGATAGTCTATTCTGCCTCAACTCGGTCATCGGCAGCCCGAATGGTGGTAGACTCAGCTGCTCGAGAGTGGAAACTCAAGTATCCTACTTCGAAAATGGATGACTGTGCTGTCGTCTGCCTATTCTTGGACGGGAAAGTGGATTCAGAATCAGAAAATGAAGAACAAGCTTCTTCTGCAACTCTTCAAACCAACCAAATGGGTCACACCGCAGAATCAGATGATGAGCAGCAGAGGTCTGAGCCAAGTTTGCAAAGGAATTATACGGTCCGATCGTCAGAAGAAAAAGACCAAATTGGAGGATTATCTTCTTCACATAATGAAGAGAATGGAGAACCAATATCTGCTGAAGATGATAATTGGTTGGGACTGGAGGGTGTAACAAGAGTAAACTCTTTGGTTCAACTCCCTAGATTTTCTTGA 1413 43.88 MGSCLSTGNQNSCRSGRNGERVSGSCLGIGVCGRIERKRTFSDHIFSLQHLNSVSNRLVYNGKTRNSCIFTQQGRKGINQDAMVVWEDFISDGAIFCGVFDGHGPHGHVVARKVRDVLPRKLVSFWQSSQLKHNRSDRTSCLPWSQKDSADGEGQNIDASEEDKSSSLWRTAFLKSYKAMDKELKSHPKLDCFCSGSTAVTLVKQGSDLFVGSIGDSRAILGSKDSSDSLVATQLTVDLKPDLPREAERIKKCKGRVFALHDEPEVPRVWLPFDNAPGLAMARAFGDFCLKDYGVISIPEFSHRVLTNNDLFVVLASDGVWDVLSNEEVVEIVYSASTRSSAARMVVDSAAREWKLKYPTSKMDDCAVVCLFLDGKVDSESENEEQASSATLQTNQMGHTAESDDEQQRSEPSLQRNYTVRSSEEKDQIGGLSSSHNEENGEPISAEDDNWLGLEGVTRVNSLVQLPRFS 470
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 31174190 31176091 - CmPI595203_02g017300.1 Cmu02g1730 409779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g1730 470 MobiDBLite consensus disorder prediction 380 452 - -
Cmu02g1730 470 CDD PP2Cc 72 373 IPR001932 -
Cmu02g1730 470 SMART PP2C_4 55 371 IPR001932 -
Cmu02g1730 470 Gene3D - 53 375 IPR036457 -
Cmu02g1730 470 MobiDBLite consensus disorder prediction 412 440 - -
Cmu02g1730 470 MobiDBLite consensus disorder prediction 137 163 - -
Cmu02g1730 470 ProSiteProfiles PPM-type phosphatase domain profile. 66 373 IPR001932 -
Cmu02g1730 470 MobiDBLite consensus disorder prediction 137 153 - -
Cmu02g1730 470 MobiDBLite consensus disorder prediction 1 19 - -
Cmu02g1730 470 MobiDBLite consensus disorder prediction 1 20 - -
Cmu02g1730 470 SUPERFAMILY PP2C-like 61 375 IPR036457 -
Cmu02g1730 470 MobiDBLite consensus disorder prediction 384 401 - -
Cmu02g1730 470 PANTHER PROTEIN PHOSPHATASE 67 372 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cmu02g1730 470 Pfam Protein phosphatase 2C 158 350 IPR001932 -
Cmu02g1730 470 FunFam probable protein phosphatase 2C 52 57 376 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g1730 Cmu-Chr2:31174190 Cmu03g2342 Cmu-Chr3:32051469 2.90E-78 dispersed
Cmu03g1626 Cmu-Chr3:18742968 Cmu02g1730 Cmu-Chr2:31174190 7.00E-105 transposed
Cmu04g0714 Cmu-Chr4:21501775 Cmu02g1730 Cmu-Chr2:31174190 2.90E-88 transposed
Cmu05g1814 Cmu-Chr5:28273839 Cmu02g1730 Cmu-Chr2:31174190 2.30E-73 transposed
Cmu08g0416 Cmu-Chr8:13435946 Cmu02g1730 Cmu-Chr2:31174190 7.40E-109 transposed
Cmu10g1190 Cmu-Chr10:4637610 Cmu02g1730 Cmu-Chr2:31174190 1.90E-110 transposed
Cmu11g0993 Cmu-Chr11:15672333 Cmu02g1730 Cmu-Chr2:31174190 1.10E-107 transposed
Cmu02g0119 Cmu-Chr2:1320331 Cmu02g1730 Cmu-Chr2:31174190 7.90E-155 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g1730 - - - 0.0