Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu02g1730 | ATGGGGAGCTGTTTGTCTACTGGCAATCAGAATAGTTGCAGAAGTGGAAGGAATGGAGAGAGAGTTTCTGGATCCTGTTTGGGAATTGGAGTTTGTGGCCGGATTGAAAGAAAGAGAACATTCTCAGATCATATTTTTTCTCTGCAGCATTTGAATTCTGTTTCTAATAGACTCGTTTATAATGGGAAGACTCGAAATTCTTGTATTTTCACTCAGCAGGGTCGAAAGGGTATAAACCAAGACGCTATGGTTGTATGGGAAGACTTCATATCAGATGGTGCAATTTTCTGTGGGGTATTTGATGGCCACGGTCCTCATGGTCATGTCGTTGCACGAAAAGTTAGAGATGTTCTGCCGAGAAAGCTAGTGTCATTCTGGCAGTCATCTCAGTTGAAGCATAATAGATCAGATAGAACTTCTTGTCTCCCGTGGAGTCAGAAGGATTCAGCAGATGGTGAAGGACAGAACATAGATGCCTCAGAGGAGGATAAATCAAGTTCTTTATGGAGAACAGCTTTCCTCAAATCATATAAAGCCATGGATAAGGAGCTCAAGTCTCATCCCAAATTGGACTGTTTCTGTAGTGGCAGTACCGCAGTTACCCTAGTGAAGCAGGGCTCAGATCTATTTGTGGGAAGTATCGGGGATTCTCGAGCGATTCTTGGATCTAAAGACAGCAGTGATTCCCTTGTAGCAACCCAGTTGACAGTAGATCTAAAGCCTGATTTACCCAGAGAAGCTGAAAGGATAAAGAAGTGTAAAGGAAGGGTATTTGCATTGCACGACGAGCCAGAAGTGCCAAGAGTGTGGCTGCCATTTGACAATGCACCTGGATTAGCAATGGCTCGAGCATTTGGCGACTTCTGTTTGAAGGACTATGGAGTTATCTCTATCCCTGAGTTCTCACACCGTGTGCTTACAAATAATGATTTGTTTGTTGTCCTTGCTTCAGATGGGGTTTGGGACGTATTGAGCAATGAAGAGGTGGTCGAGATAGTCTATTCTGCCTCAACTCGGTCATCGGCAGCCCGAATGGTGGTAGACTCAGCTGCTCGAGAGTGGAAACTCAAGTATCCTACTTCGAAAATGGATGACTGTGCTGTCGTCTGCCTATTCTTGGACGGGAAAGTGGATTCAGAATCAGAAAATGAAGAACAAGCTTCTTCTGCAACTCTTCAAACCAACCAAATGGGTCACACCGCAGAATCAGATGATGAGCAGCAGAGGTCTGAGCCAAGTTTGCAAAGGAATTATACGGTCCGATCGTCAGAAGAAAAAGACCAAATTGGAGGATTATCTTCTTCACATAATGAAGAGAATGGAGAACCAATATCTGCTGAAGATGATAATTGGTTGGGACTGGAGGGTGTAACAAGAGTAAACTCTTTGGTTCAACTCCCTAGATTTTCTTGA | 1413 | 43.88 | MGSCLSTGNQNSCRSGRNGERVSGSCLGIGVCGRIERKRTFSDHIFSLQHLNSVSNRLVYNGKTRNSCIFTQQGRKGINQDAMVVWEDFISDGAIFCGVFDGHGPHGHVVARKVRDVLPRKLVSFWQSSQLKHNRSDRTSCLPWSQKDSADGEGQNIDASEEDKSSSLWRTAFLKSYKAMDKELKSHPKLDCFCSGSTAVTLVKQGSDLFVGSIGDSRAILGSKDSSDSLVATQLTVDLKPDLPREAERIKKCKGRVFALHDEPEVPRVWLPFDNAPGLAMARAFGDFCLKDYGVISIPEFSHRVLTNNDLFVVLASDGVWDVLSNEEVVEIVYSASTRSSAARMVVDSAAREWKLKYPTSKMDDCAVVCLFLDGKVDSESENEEQASSATLQTNQMGHTAESDDEQQRSEPSLQRNYTVRSSEEKDQIGGLSSSHNEENGEPISAEDDNWLGLEGVTRVNSLVQLPRFS | 470 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 31174190 | 31176091 | - | CmPI595203_02g017300.1 | Cmu02g1730 | 409779 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu02g1730 | 470 | MobiDBLite | consensus disorder prediction | 380 | 452 | - | - | |
Cmu02g1730 | 470 | CDD | PP2Cc | 72 | 373 | IPR001932 | - | |
Cmu02g1730 | 470 | SMART | PP2C_4 | 55 | 371 | IPR001932 | - | |
Cmu02g1730 | 470 | Gene3D | - | 53 | 375 | IPR036457 | - | |
Cmu02g1730 | 470 | MobiDBLite | consensus disorder prediction | 412 | 440 | - | - | |
Cmu02g1730 | 470 | MobiDBLite | consensus disorder prediction | 137 | 163 | - | - | |
Cmu02g1730 | 470 | ProSiteProfiles | PPM-type phosphatase domain profile. | 66 | 373 | IPR001932 | - | |
Cmu02g1730 | 470 | MobiDBLite | consensus disorder prediction | 137 | 153 | - | - | |
Cmu02g1730 | 470 | MobiDBLite | consensus disorder prediction | 1 | 19 | - | - | |
Cmu02g1730 | 470 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Cmu02g1730 | 470 | SUPERFAMILY | PP2C-like | 61 | 375 | IPR036457 | - | |
Cmu02g1730 | 470 | MobiDBLite | consensus disorder prediction | 384 | 401 | - | - | |
Cmu02g1730 | 470 | PANTHER | PROTEIN PHOSPHATASE | 67 | 372 | IPR015655 | GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Cmu02g1730 | 470 | Pfam | Protein phosphatase 2C | 158 | 350 | IPR001932 | - | |
Cmu02g1730 | 470 | FunFam | probable protein phosphatase 2C 52 | 57 | 376 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu02g1730 | Cmu-Chr2:31174190 | Cmu03g2342 | Cmu-Chr3:32051469 | 2.90E-78 | dispersed | |
Cmu03g1626 | Cmu-Chr3:18742968 | Cmu02g1730 | Cmu-Chr2:31174190 | 7.00E-105 | transposed | |
Cmu04g0714 | Cmu-Chr4:21501775 | Cmu02g1730 | Cmu-Chr2:31174190 | 2.90E-88 | transposed | |
Cmu05g1814 | Cmu-Chr5:28273839 | Cmu02g1730 | Cmu-Chr2:31174190 | 2.30E-73 | transposed | |
Cmu08g0416 | Cmu-Chr8:13435946 | Cmu02g1730 | Cmu-Chr2:31174190 | 7.40E-109 | transposed | |
Cmu10g1190 | Cmu-Chr10:4637610 | Cmu02g1730 | Cmu-Chr2:31174190 | 1.90E-110 | transposed | |
Cmu11g0993 | Cmu-Chr11:15672333 | Cmu02g1730 | Cmu-Chr2:31174190 | 1.10E-107 | transposed | |
Cmu02g0119 | Cmu-Chr2:1320331 | Cmu02g1730 | Cmu-Chr2:31174190 | 7.90E-155 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu02g1730 | - | - | - | 0.0 |