Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g1752 ATGGGCTGCATCTGTTCTAAGGTTTTAGCTGACGAGTGTAGTGACAATGAACATGATACCTCCAAAAGAGCTCATTCCCCAATTAAACGCCTCTCTGAATTAAAAACATCAAGATCTGGCTCTCCCACATCTGAGAAAATTTGGGAGAAAGATAGGCTGAATTGTAGTGATGTTACGGTTATGTTGTTCGATACAACGGCGAATGGTTCTCTACGCTCACACGGCAAGCTTTCTAATGAGAAGAAGAGCACAGACATCCCTGATGTCACCATTATCAACCATCCATTTATGGGAAAGATTCCGAAGGCTACTGAGGCCGAGCAAGTCGCTGCCGGGTGGCCGAGTTGGCTGGCTGTGGTGGCTGGTGAAGCTATCAAAGGCTGGTTGCCAAAACGTGCAAATAACTTCATCAAGTTCGAGAAAATTGGCCAAGGAACTTATAGCAGTGTGTATAAAGCTCGGGATATCATTCAAGATAAAGTTGTGGCCTTGAAAAGGATCAGATTTGACAATCAAGATGCTGAGAGTATCAAGTTTATGGCAAGGGAAATCCTTGTTTTGAGAAGGCTTGATCATCCAAATATAGTTAAGTTGGAAGGTTTGATCACATCACAAACATCATGTACTATGTACCTTGTTTTTGAATATATGGAACATGATCTTACCGGACTCGCATCATGGCCTGGCGCGTCGTTCACCGAACCACAGATGAAGTGTTACATGAAGCAACTTTTGAGTGGACTTGATCATTGTCACAGTAATGGGGTTCTTCATAGAGACATAAAGGGCTCAAATCTTCTTATTGACAACAATGGCATTTTGAAGATAGCAGATTTTGGGTTGGCTGTTTTCTTTGATTCTCATTCAACAGTTCCAATGACGAGCCGTGTAATAACTCTCTGGTATCGACCACCAGAACTTTTACTTGGAGCGTCTAAATATGGAGTTGAAGTTGATTTATGGAGTGCTGGCTGCATTCTAGGAGAGTTATATACTGGCAAGCCCATCTTACCAGGGAAAACAGAGGTTGAACAACTACATAAAATATTTAAGCTATGTGGTTCCCCTTCCAAGGACTATTGGAAAAAATTGCATTTGAAGCAATCAACAAGCATGAAACCTCCACAGTCATATGAAAGATGTCTTCGAGAAAGATATAACGATATTCCTCGTGCTGCTGTTGACCTTATGGACACTTTGTTATCTATAGATCCTACAGGGCGAGGAACTGCTGCTTCCGCACTCGACAGTGAGTTCTTTACAACAAGGCCCTTACCAAGCGATCCTTCAAATTTGCCAAAATACCCTCCAAGCAAAGAGATCGATTCAAAACTGCGTGAAGAGGAAGCAAGAAGGCAACAAGGAGTAGGTGGTGGGAGAAGCCAAATAGTCTACCAAGAAGCAAAAGGACTGAAGCAATCTAGAGTAGTTCCTGCTGCAAAGGCTAATGCTGAGTTGGTTATTTCATTACTGAGAAAACAAAGTCGTTCGAGCGCGAAGTACCGGAATGAAACGTATTCTTATGGTTTGGTGTCGAAAAGAACCTCAAATTCAGGACCTATAACTCAGGGACCGAGATTTACAAACAACAAAAAGGAACCAAAACATGTTTCTATGGTTTCCAGTGAGTGTTTAATATCATCTGGTCCTATTGAATTTGTTTCTTACAAATATGTCAGAGAAAGAAATGAAGTTTCAAAGCCAGAATCAATGAGCCAAGACAAAAATCTTCCTCTTCTATCCAGTTCTGCTGAAGAGTCATCCATCAAAAAGCTAAACGAAGACAAAGTTGGTATGAAGAAAGTTACAAATTCTTGTCAGTTGGAAGATTCAAAGGCCTCAGCTCTAATAGTTGGCTAA 1860 41.34 MGCICSKVLADECSDNEHDTSKRAHSPIKRLSELKTSRSGSPTSEKIWEKDRLNCSDVTVMLFDTTANGSLRSHGKLSNEKKSTDIPDVTIINHPFMGKIPKATEAEQVAAGWPSWLAVVAGEAIKGWLPKRANNFIKFEKIGQGTYSSVYKARDIIQDKVVALKRIRFDNQDAESIKFMAREILVLRRLDHPNIVKLEGLITSQTSCTMYLVFEYMEHDLTGLASWPGASFTEPQMKCYMKQLLSGLDHCHSNGVLHRDIKGSNLLIDNNGILKIADFGLAVFFDSHSTVPMTSRVITLWYRPPELLLGASKYGVEVDLWSAGCILGELYTGKPILPGKTEVEQLHKIFKLCGSPSKDYWKKLHLKQSTSMKPPQSYERCLRERYNDIPRAAVDLMDTLLSIDPTGRGTAASALDSEFFTTRPLPSDPSNLPKYPPSKEIDSKLREEEARRQQGVGGGRSQIVYQEAKGLKQSRVVPAAKANAELVISLLRKQSRSSAKYRNETYSYGLVSKRTSNSGPITQGPRFTNNKKEPKHVSMVSSECLISSGPIEFVSYKYVRERNEVSKPESMSQDKNLPLLSSSAEESSIKKLNEDKVGMKKVTNSCQLEDSKASALIVG 619
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 31420842 31423335 + CmPI595203_02g017520.1 Cmu02g1752 409801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g1752 619 ProSiteProfiles Protein kinase domain profile. 136 420 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu02g1752 619 PANTHER CELL DIVISION PROTEIN KINASE 136 420 IPR050108 GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER)
Cmu02g1752 619 Gene3D Transferase(Phosphotransferase) domain 1 224 458 - -
Cmu02g1752 619 SUPERFAMILY Protein kinase-like (PK-like) 131 427 IPR011009 -
Cmu02g1752 619 Gene3D Phosphorylase Kinase; domain 1 130 223 - -
Cmu02g1752 619 Pfam Protein kinase domain 138 420 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu02g1752 619 FunFam probable serine/threonine-protein kinase At1g54610 219 460 - -
Cmu02g1752 619 MobiDBLite consensus disorder prediction 516 535 - -
Cmu02g1752 619 MobiDBLite consensus disorder prediction 439 454 - -
Cmu02g1752 619 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu02g1752 619 MobiDBLite consensus disorder prediction 570 585 - -
Cmu02g1752 619 ProSitePatterns Protein kinases ATP-binding region signature. 142 165 IPR017441 GO:0005524(InterPro)
Cmu02g1752 619 MobiDBLite consensus disorder prediction 420 458 - -
Cmu02g1752 619 CDD STKc_CDK9_like 136 420 - -
Cmu02g1752 619 FunFam probable serine/threonine-protein kinase At1g54610 123 218 - -
Cmu02g1752 619 MobiDBLite consensus disorder prediction 565 585 - -
Cmu02g1752 619 SMART serkin_6 136 420 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g1752 Cmu-Chr2:31420842 Cmu05g1044 Cmu-Chr5:9626629 1.70E-174 dispersed
Cmu02g1752 Cmu-Chr2:31420842 Cmu02g1753 Cmu-Chr2:31429115 4.80E-166 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75316 PF00069 Pkinase 3.80E-68 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g1752 - - - 0.0