Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g1753 ATGTTCTTTCTTGATTCTGGAAGATTGGACTTTAGAAATTCGTTCCAGTGTTTTTTCTCAACGTCTGCGGTTTGTGGTTCAAAATCCCGTGTTTTGAAAGTCTTCTCTGAATTGGTTGGGTATATAGGAAGGTTTGGTTTCTGGGCTGCAAAAATGGGTTGTCAGTGTTCCAAGCCTTCTATTGATGAAGATGGCAAAAACAGAGCCTCTGAGAAATTTCCTTCACGAAAGGGTTCACGAGATAATTTATTAAAAAAAGGAGAGGATATGCGATTGAATTCTGTGAAAAGAGACGAAGATGTTCGAATAAATTCCTCACAGAGAGCAGATAGTATTCGATCAAAGGTGAAAACGGATGGTGTTGACATGAAACTTGCTTATTTGGACAAGAGAGTCAACGGCTCTAACAGGGTACACGATGATCAAATTGAAAAAAAGAAGAGGGAGAGGTTGGGAGCTGCCATTTCTGCTAATTATCCTGGAAAAGGAAGCATTCCAAAGGCTATGGAAGCGGAGCAAGTTGCAGCTGGTTGGCCAAGCTGGCTCTCCTCTGTGGCCGGTGAAGCGCTCGAGGGATGGCTGCCACGGAGAGCCGAAACTTTTGAGAAACTTGACAAGATAGGACAAGGCACATATAGTAGTGTTTACAAGGCTCGTGATATCATTCAAAATAAACTAGTCGCTCTAAAACGAGTTCGATTCGATAATCTCGATGTGGAGAGTGTCAAGTTTATGGCCCGGGAAATCCTTATCCTGCGTAGGCTTGATCATCCAAATGTTATAAAATTGGAAGGCTTGATTACATCACCGCGATCATGTAGCTTGTACCTCATTTTTGAGTATATGGAGCATGACCTTACAGGCCTTGCATCTCGGCCTGGGGTCAAGTTCAGCGAACCACAGGTTAAATGCTATATGCAACAACTTCTAAGGGGGCTTGATTATTGCCACAGTCGTGGTGTCCTCCACCGCGATATAAAGGGTTCAAATCTCCTAATTGACGACAATGGCATCTTGAAGATTGCAGATTTTGGATTAGCAAGCCCTTTTGACCCCCATAATCAAGTTCCCTTAACAAGCCGTGTAGTGACTCTATGGTACCGACCACCTGAACTTCTGCTTGGAGCTTCTTATTATGGGGTTGCAGTGGACCTGTGGAGTACGGGTTGCATACTAGCGGAGCTATATTCTGGGAAGCCTATCTTACCTGGAAAAACTGAGGTCGAACAGTTGCACAAGATATTTAAACTTTGTGGGTCGCCGCCTGAGAATTATTGGAAGAAATTGCAATTACCTCATTCAACTGGATTTAAGACGGCTCAGCCATACCGACGTTGTATCGGGGGAATGCTCAAGGATTTCCCACCATCTGCGGTGGCTCTTGTGGATAAGTTGCTTTCTATAGATCCTGCTCATCGAGGAACAGCAGCTGCTGCTCTAAAGAGCGAGTTTTTTACGACTAAACCTCTTGCTTGCGAGCCTACGAGTCTGCCCAAATATCCTCCCAGCAAAGAGATTGATGCAAAATTCCCTGGCTGCAGAAGGCAGTCAAGAGCTGAGGGCAAAGACCCTAAAGATTATGTGGAAGGGAGGCGACCTAAAGAAGCTCACATTAATCTTTCTCTGAATGCTAAGGATGAAGTAAACATGTCAATGCAGAAAAGGCAAGGTTATTCAAGTTTTAAGGGCCGGGGCGGAGTGTTGAATCCGCATGGGGATGAGACAGTTTCTGGGTTTTTGATTCCTCCGCCCAAACAAAATCAATCTGTCACAGAAATTTGCTCAGATACAGGCCGGATTTCGCATTCAGGACCGCTAATTAGCAAACCAGATTGGATGAAATCTAGGAAGCAACTCGATGACCATTCGATGGCGCTTGATGGATCCAATCTCTCAGTATTATCCCGTTTAGTAGCAACGAGGTCTAATATATCTGATCATCCCTATGATAGACCGGGTCCATCACAATCAGAAGTAGGCAGATTGCCTGACTTCGTCAGGGATTCAGAGTCAACGAGAAAGCAGGACCGAATATTTTATACACACCGAGTTGCGGATTCATATCGAATAGAGAACGAAAAAGTTTGTGCTAAAGAACAGTCCCTGCTTGCTTATGGGACAGACATGAACAAGCTTTATACTTCTGGTCCAATCCTTGGTCCATCAAACAACTTAGATAAAATTCTGAAAGAGCGAGACCGTCAGATTCAAGAATACGCTCGACAAGCACGACACGGTAAAGCTGCTAACAGTCAGTTAAAGAATTCAAGAGCAACAACTGGAAAACATCTGATGTCGAGCCATGGAATGTGA 2313 44.19 MFFLDSGRLDFRNSFQCFFSTSAVCGSKSRVLKVFSELVGYIGRFGFWAAKMGCQCSKPSIDEDGKNRASEKFPSRKGSRDNLLKKGEDMRLNSVKRDEDVRINSSQRADSIRSKVKTDGVDMKLAYLDKRVNGSNRVHDDQIEKKKRERLGAAISANYPGKGSIPKAMEAEQVAAGWPSWLSSVAGEALEGWLPRRAETFEKLDKIGQGTYSSVYKARDIIQNKLVALKRVRFDNLDVESVKFMAREILILRRLDHPNVIKLEGLITSPRSCSLYLIFEYMEHDLTGLASRPGVKFSEPQVKCYMQQLLRGLDYCHSRGVLHRDIKGSNLLIDDNGILKIADFGLASPFDPHNQVPLTSRVVTLWYRPPELLLGASYYGVAVDLWSTGCILAELYSGKPILPGKTEVEQLHKIFKLCGSPPENYWKKLQLPHSTGFKTAQPYRRCIGGMLKDFPPSAVALVDKLLSIDPAHRGTAAAALKSEFFTTKPLACEPTSLPKYPPSKEIDAKFPGCRRQSRAEGKDPKDYVEGRRPKEAHINLSLNAKDEVNMSMQKRQGYSSFKGRGGVLNPHGDETVSGFLIPPPKQNQSVTEICSDTGRISHSGPLISKPDWMKSRKQLDDHSMALDGSNLSVLSRLVATRSNISDHPYDRPGPSQSEVGRLPDFVRDSESTRKQDRIFYTHRVADSYRIENEKVCAKEQSLLAYGTDMNKLYTSGPILGPSNNLDKILKERDRQIQEYARQARHGKAANSQLKNSRATTGKHLMSSHGM 770
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 31429115 31432805 + CmPI595203_02g017530.1 Cmu02g1753 409802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g1753 770 MobiDBLite consensus disorder prediction 60 82 - -
Cmu02g1753 770 Gene3D Transferase(Phosphotransferase) domain 1 284 523 - -
Cmu02g1753 770 FunFam probable serine/threonine-protein kinase At1g54610 284 523 - -
Cmu02g1753 770 FunFam probable serine/threonine-protein kinase At1g54610 188 283 - -
Cmu02g1753 770 MobiDBLite consensus disorder prediction 61 82 - -
Cmu02g1753 770 PANTHER CELL DIVISION PROTEIN KINASE 200 485 IPR050108 GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER)
Cmu02g1753 770 MobiDBLite consensus disorder prediction 503 530 - -
Cmu02g1753 770 Pfam Protein kinase domain 201 485 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu02g1753 770 SUPERFAMILY Protein kinase-like (PK-like) 196 490 IPR011009 -
Cmu02g1753 770 CDD STKc_CDK9_like 201 485 - -
Cmu02g1753 770 MobiDBLite consensus disorder prediction 744 770 - -
Cmu02g1753 770 ProSiteProfiles Protein kinase domain profile. 201 485 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu02g1753 770 Gene3D Phosphorylase Kinase; domain 1 188 283 - -
Cmu02g1753 770 MobiDBLite consensus disorder prediction 748 770 - -
Cmu02g1753 770 MobiDBLite consensus disorder prediction 508 530 - -
Cmu02g1753 770 ProSitePatterns Serine/Threonine protein kinases active-site signature. 321 333 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu02g1753 770 SMART serkin_6 201 485 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu02g1753 770 MobiDBLite consensus disorder prediction 644 672 - -
Cmu02g1753 770 ProSitePatterns Protein kinases ATP-binding region signature. 207 230 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g1753 Cmu-Chr2:31429115 Cmu05g1044 Cmu-Chr5:9626629 2.10E-211 dispersed
Cmu02g1752 Cmu-Chr2:31420842 Cmu02g1753 Cmu-Chr2:31429115 4.80E-166 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75317 PF00069 Pkinase 1.90E-67 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g1753 - - - 0.0