Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g1829 ATGGATGATCTTGGAGCTCCCATTTCATCGGTCGATTCCGAGAGGTGTAGATTTCTAGGTGTCATTGGAATTCTTTGTGTAAAAATAGAAGTGGGGGGTCGATTTGCTTTAGGTTTATTGGGTTTTGGTTTGATGGAGGATTGGGGAAGGTTCATGGAAAAGTGGGCTTCTGCACTTGTGATCCGAATGCAGCCAGATCAAGCCAAAAAGAATTCAACCGAAGTGGAGTTCTTTTCTGATTATGGCGATGCGAGTAGATACAAAATTCAGGAAGTAATCGGGAAAGGAAGCTATGGGGTTGTCTGTTCCGCAATTGACACCCGCACCGGCGACAAGGTTGCAATAAAGAAGATACATAATATTTTTGAGCATATATCTGACGCGGTTAGAATTCTTCGTGAGATAAAGCTGCTTAGACTTCTTCGCCATCCTGATATTGTTGAAATTAAACACATTATGCTGCCACCTTCAAGGAGGGATTTCAAAGATATCTATGTTGTTTTCGAGCTCATGGAATCAGATCTCCACCAAGTTATTAAAGCAAATGATGATCTGACTCGAGAACATTATCAGTTTTTCCTTTACCAACTTCTTCGTGCATTAAAATATATCCATACAGCAAATGTCTACCATCGTGATTTAAAACCAAAGAATATATTAGCAAATGCAAATTGTAAACTTAAAATTTGTGATTTTGGATTAGCAAGAGTTGCCTTCAGTGACACACCAACAACAATTTTCTGGACGGATTATGTTGCTACTAGATGGTACCGAGCTCCAGAGCTGTGTGGTTCATTTTTCTCGAAGTATACACCTGCAATTGATATATGGAGTATTGGCTGCATATTTGCTGAAGTATTAATGGGGAAGCCACTTTTTCCTGGTAAAAACGTTGTCCACCAGCTTGATTTGATGACAGATCTCCTTGGAACTCCTTCATTAGATACAATCTCCAGGGTACGTAATGACAAGGCTAGAAGATATTTAACTACTATGAGGAAAAAGCAGCCGGTACCATTTTCTCAAAAGTTCCCAAATGCAGATCCATTAGCGCTGAGGCTACTAGAAAGACTGCTTGCTTTTGATCCAAAAGATAGACCAACTGCTGAAGAGGCACTGGCTGATCCATACTTCAAGGGATTGGCAAAAATTGAGAGGGAACCTTCCTGCCAGCCAATCACAAAGATGGAATTTGAATTTGAGAGACGGAGGGTCACAAAAGAAGACATTCAAGAGCTAATCTTCCGGGAGATACTAGAATATCATCCTCAGCTACTAAAAGACTACATGAATGGGACGGAGAGAACGAATTTTCTATATCCAAGTGCTGTTGACCAATTTAGAAAGCAGTTTGCGCATCTGGAGGAAAATGGTGGTAAAAGTGCGCCAGTTATTCCTCTTGACAGAAAGCATGTGTCCCTTCCAAGGTCAACAGTTGTACATTCGAACCCGGTCTATTCTAAGGACCAAGTAAATAATGTAACTCTCCAAGATGGGAAGATCTCTGAAGAGGCATACGGCAAGAATTCCCGAGATAGTGAAGGACGGCTAACAAATATATCGAGGGCCATGCAGGCACCACAAAAAATCCCATTTGCAGCTAAGCCTGGAAGAGTGGTTGGACCGGTTATAGCAGATGAGAATGGGAGGCTGGTGAAGGAACCATACGATCCAAGAACGTTGATCCGAGGTGCCATTCTTCCTCCTGCATATCACTACCACCAAAAACCCGTTGCTGGAAATCAAGAAAGATCTGCAGCAGAAACTAAACTTGATATTTCTTTAAGGGCCGCTAAGCAAGCATCCCAGTGTGGCATGGCTTCCAAATTAGGATCAGATATTGCCATCAGCATTGACTCGAACCCCTTTTACATGACACGTGCCGGAGTGAACAAGGTCGAACTCAAGGACCAAATATCCATCGATGCAAACTTTCTTCAGGCCAAGGCCGCCCAATACGGTGGTCTTAGTGCAGCAACAGCCACCGCCACATCGGTTGCTCACAGAAAGGTGGTTGCGGGAATATTAATGGAGAACGAGATTAATATTGTAAATGACGGGGCATCGGGGGACGATCAGACCACAGAGGATTTTTTTGATGTTGACCAGCGGGAGAACGATGCAAAGGTCGCGGAGCTGAACCATAGAATTGAGGTTTTGGAGCGTGAAAAGAAAAAATTGGTTGATGAAAATGAAGAAATCAAAGATAAGATTAAAAGGTTGTCAGCGGAGATTGAAGGGTTGAAGAGTGAAGAGGGGAGGCTGATAGAACAACTGAAAGAAATGGAGAAACAAGTTGAACGTTCTGAAGAGGGAAATAAGGTGGTAGAGTCGGTTGCGGCAAGGGCACTGGAGCTTGAGACTGAAGTCTCGAGGCTACAGCATGATTTGATATCTGCAATGAATGGAGCTGATGAGGCGAATGCTGAAGTTGCGGAGTTGAGGAAAAATTTGGGGGAAAAGGGAGTGAAGGTTGCAGCTCTGGAGGAAGAGTTGGAAGCCCTGAAGAAAGCAAAGGCAGAGAGTGAAAAGAAAGTCAGAGAATTGGAGAGGAAAGTTGGGGTTTTGGAGGTCAAGGAGATAGAGGAGAAGAGTAAAAAAGTTAGGGTAGAGGAGGAAATGAGAGACAAAATTGAGGAGAAAGAGAGGGAAATCACCAGTTTCAAAAAGACTATTGAGAATTTGGAATTGGTGGTAACAAAGAACGGCCTGGAATTAGATAAGTGGATCAAGGAGAAACTTAAGGTGGAAGAGTTGTTGAAGGAGTCAGAGGAGAAAACGAAAATGTTTGAGTCGAAAATGGTTCAGTTGCAGAAGGAAGTAGAGGAAGCACAGAAAGTCATTAGTGGATTAAAGGAGAAAGCGGTGAATGCGTTGAATGGAACTGCAGAGGAACTCAAGTCGGCTTTCGAAGGTGCAGAGAAGGAGTTGAATTTGAACTGGCCTATAATTGCAGGTTCAACAGGAGTTGTTGCTGCCGTCGCTGCACTGGCCTTTGTTTTAGTTGTTCATGGTTCCACCATTGATGGAGACAGATCAGCACTCATAAGTTCATGGGTGAAACTCGCAGCTAACTCTTCCTCAAAACAATGGCAGCTAGAGGTGCAGTTGTACGCCGGCATTTGCTAG 3129 43.27 MDDLGAPISSVDSERCRFLGVIGILCVKIEVGGRFALGLLGFGLMEDWGRFMEKWASALVIRMQPDQAKKNSTEVEFFSDYGDASRYKIQEVIGKGSYGVVCSAIDTRTGDKVAIKKIHNIFEHISDAVRILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLMGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTTMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKIEREPSCQPITKMEFEFERRRVTKEDIQELIFREILEYHPQLLKDYMNGTERTNFLYPSAVDQFRKQFAHLEENGGKSAPVIPLDRKHVSLPRSTVVHSNPVYSKDQVNNVTLQDGKISEEAYGKNSRDSEGRLTNISRAMQAPQKIPFAAKPGRVVGPVIADENGRLVKEPYDPRTLIRGAILPPAYHYHQKPVAGNQERSAAETKLDISLRAAKQASQCGMASKLGSDIAISIDSNPFYMTRAGVNKVELKDQISIDANFLQAKAAQYGGLSAATATATSVAHRKVVAGILMENEINIVNDGASGDDQTTEDFFDVDQRENDAKVAELNHRIEVLEREKKKLVDENEEIKDKIKRLSAEIEGLKSEEGRLIEQLKEMEKQVERSEEGNKVVESVAARALELETEVSRLQHDLISAMNGADEANAEVAELRKNLGEKGVKVAALEEELEALKKAKAESEKKVRELERKVGVLEVKEIEEKSKKVRVEEEMRDKIEEKEREITSFKKTIENLELVVTKNGLELDKWIKEKLKVEELLKESEEKTKMFESKMVQLQKEVEEAQKVISGLKEKAVNALNGTAEELKSAFEGAEKELNLNWPIIAGSTGVVAAVAALAFVLVVHGSTIDGDRSALISSWVKLAANSSSKQWQLEVQLYAGIC 1042
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 32199954 32208799 - CmPI595203_02g018290.1 Cmu02g1829 409878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g1829 1042 FunFam Mitogen-activated protein kinase 173 401 - -
Cmu02g1829 1042 Coils Coil 703 859 - -
Cmu02g1829 1042 ProSitePatterns MAP kinase signature. 122 225 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu02g1829 1042 Coils Coil 861 898 - -
Cmu02g1829 1042 FunFam Mitogen-activated protein kinase 77 180 - -
Cmu02g1829 1042 SUPERFAMILY Protein kinase-like (PK-like) 83 382 IPR011009 -
Cmu02g1829 1042 Gene3D - 699 869 - -
Cmu02g1829 1042 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 84 419 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Cmu02g1829 1042 Coils Coil 956 976 - -
Cmu02g1829 1042 PRINTS Tropomyosin signature 919 944 IPR000533 -
Cmu02g1829 1042 PRINTS Tropomyosin signature 829 857 IPR000533 -
Cmu02g1829 1042 PRINTS Tropomyosin signature 709 726 IPR000533 -
Cmu02g1829 1042 PRINTS Tropomyosin signature 860 883 IPR000533 -
Cmu02g1829 1042 Gene3D Transferase(Phosphotransferase) domain 1 173 401 - -
Cmu02g1829 1042 CDD STKc_TDY_MAPK 86 423 - -
Cmu02g1829 1042 Pfam Protein kinase domain 87 378 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu02g1829 1042 ProSitePatterns Protein kinases ATP-binding region signature. 93 117 IPR017441 GO:0005524(InterPro)
Cmu02g1829 1042 ProSiteProfiles Protein kinase domain profile. 87 378 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu02g1829 1042 SMART serkin_6 87 378 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu02g1829 1042 Coils Coil 906 954 - -
Cmu02g1829 1042 Gene3D Phosphorylase Kinase; domain 1 102 424 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g1829 Cmu-Chr2:32199954 Cmu07g1025 Cmu-Chr7:25002257 1.80E-205 dispersed
Cmu06g0560 Cmu-Chr6:6184294 Cmu02g1829 Cmu-Chr2:32199954 2.40E-212 transposed
Cmu02g1829 Cmu-Chr2:32199954 Cmu09g2134 Cmu-Chr9:37458842 2.10E-246 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75321 PF00069 Pkinase 4.50E-66 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g1829 - - - 0.0