Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g1832 ATGTGGATCCTTTTTCGGAAAAAATCTAAGAGATCTGTGGACAAATTCCCTATTACCCAAATACCTAATTTTTCAAAAGATATCAGGATAGATCAGGTCGGGATTCAAATTCCCAATGACCACCCTGAACATAGACTTCTTTCAGTTGATGTCAAAAGAAATGAAGAAAATTCAGAAGTTATGGCTGTGACAAAATCAAGTGAACATGATAACCATAGCCAATGCAGTTCCACTTACCAACATGAAAAAGCTGGCAATCCACAATCAGGGGAAGAAGGAAGCTCTGGAAATGCTAGGAAGCAGACTTCGAGGTCGTATGGAGGATATGGAGGAATTGTGCCACCGTCTCCTCTCGTTGGCTTGCCAGAAATCTCACATCTTGGGTGGGGCCACTGGTTCACTCTCAGGGATCTAGAGCTTGCAACTAATCGCTTTTCTACCGAAAATATTCTTGGGGAAGGGGGATATGGGGTTGTGTATAAAGGCAGACTCATCAATGGCACTGAGGTTGCAGTGAAAAAACTACTCAATAATCTGGGTCAGGCAGAGAAAGAATTTAGAGTTGAAGTGGAGGCTATTGGTCACGTTCGGCATAAGAATCTTGTCCGACTGCTGGGTTATTGCATAGAGGGAGTTCATAGGATGCTAGTATATGAATATGTGAACAATGGCAATCTAGAACAGTGGCTACATGGAGCCATGTGCCAGCATGGCACGCTTACTTGGGAGGCTCGCATGAAGGTGCTTCTTGGCACTGCTAAGGCGCTTGCGTATTTACACGAAGCAATTGAGCCAAAAGTTGTTCACAGAGATATAAAATCAAGCAACATTTTGATTGATGACGAGTTCAATGCCAAAGTTTCTGATTTCGGATTGGCCAAACTCTTGGGCTCTGGAGAGAGTCACATCACAACTAGAGTTATGGGAACATTTGGGTATGTGGCACCAGAATATGCAAATACGGGCTTGTTGAATGAAAAGAGTGACATTTATAGCTTCGGTGTTCTCCTGCTAGAAGCAATTACAGGGAGGGACCCTGTGGATTATGCACGTCCTTCTAATGAGGTTAATCTGGTTGAGTGGCTAAAGATGATGGTAGCAACAAGGAGAGCAGAGGAAGTTGTGGACATGAACCTTGAGATCAAGCCAACTACTCGTGCTTTGAAACGTGCCCTTCTTGTTGCACTTAGGTGTATTGATCCTGAATCAATCAAGAGACCCAAGATGAGTCAAGTTGTAAGAATGCTTGAAGCCGACGAATTTCCACTCCACGAGGATAGAAGGAACCGAAAAAGCCGATCGATAAGCTTGGAGATCGAGTCAATGAAAGAAATATCAGGTCCAGAGCAGACGGGTGGGCCGTCCGAGAGCCATAAATCAGAGACAAGCCATGAATAG 1398 44.13 MWILFRKKSKRSVDKFPITQIPNFSKDIRIDQVGIQIPNDHPEHRLLSVDVKRNEENSEVMAVTKSSEHDNHSQCSSTYQHEKAGNPQSGEEGSSGNARKQTSRSYGGYGGIVPPSPLVGLPEISHLGWGHWFTLRDLELATNRFSTENILGEGGYGVVYKGRLINGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMCQHGTLTWEARMKVLLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLGSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYARPSNEVNLVEWLKMMVATRRAEEVVDMNLEIKPTTRALKRALLVALRCIDPESIKRPKMSQVVRMLEADEFPLHEDRRNRKSRSISLEIESMKEISGPEQTGGPSESHKSETSHE 465
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 32243744 32246766 - CmPI595203_02g018320.1 Cmu02g1832 409881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g1832 465 MobiDBLite consensus disorder prediction 57 109 - -
Cmu02g1832 465 SMART serkin_6 145 399 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu02g1832 465 ProSiteProfiles Protein kinase domain profile. 145 409 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu02g1832 465 FunFam Putative receptor-like protein kinase 127 220 - -
Cmu02g1832 465 MobiDBLite consensus disorder prediction 424 465 - -
Cmu02g1832 465 ProSitePatterns Serine/Threonine protein kinases active-site signature. 267 279 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu02g1832 465 SUPERFAMILY Protein kinase-like (PK-like) 129 421 IPR011009 -
Cmu02g1832 465 FunFam Putative receptor-like serine/threonine-protein kinase 221 431 - -
Cmu02g1832 465 CDD STKc_IRAK 151 417 - -
Cmu02g1832 465 MobiDBLite consensus disorder prediction 424 438 - -
Cmu02g1832 465 Gene3D Phosphorylase Kinase; domain 1 127 220 - -
Cmu02g1832 465 ProSitePatterns Protein kinases ATP-binding region signature. 151 174 IPR017441 GO:0005524(InterPro)
Cmu02g1832 465 Pfam Protein kinase domain 146 414 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu02g1832 465 Gene3D Transferase(Phosphotransferase) domain 1 221 434 - -
Cmu02g1832 465 MobiDBLite consensus disorder prediction 67 104 - -
Cmu02g1832 465 Coils Coil 165 185 - -
Cmu02g1832 465 PANTHER OS01G0323000 PROTEIN 2 439 IPR052232 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g1832 Cmu-Chr2:32243744 Cmu06g0403 Cmu-Chr6:4618965 1.20E-145 dispersed
Cmu02g2124 Cmu-Chr2:34903765 Cmu02g1832 Cmu-Chr2:32243744 1.10E-25 transposed
Cmu02g1832 Cmu-Chr2:32243744 Cmu09g2146 Cmu-Chr9:37542689 1.80E-202 wgd
Cmu02g1832 Cmu-Chr2:32243744 Cmu09g1777 Cmu-Chr9:33954443 2.40E-53 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75322 PF00069 Pkinase 1.30E-48 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g1832 - - - 0.0