Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g1834 ATGGCAGCTTCATCAATGGCTCTCTCCTCCCCATCTCTCGCCGGCCAAGCCGTCAAATTATCCCCCACGACCTCCGACCTCCTGGGCGACGGTCGCATCACCATGAGAAAAACTGCCGGAAAGCCCAAGCCCATTTCCTCCGGAAGCCCATGGTACGGCCCAGATCGCGTCAAATACCTAGGCCCATTCTCTGGCGAGCCCCCTTCTTATTTGACTGGAGAATTCCCCGGCGATTACGGCTGGGACACCGCCGGTTTATCCGCCGACCCGGAAACTTTCGCGAAAAACCGTGAGCTGGAAGTGATCCACTCGAGATGGGCCATGCTCGGCGCTCTGGGCTGCGTCTTCCCGGAGCTGCTGTCTCGCAACGGAGTAAAATTCGGCGAAGCCGTGTGGTTCAAAGCTGGGTCTCAAATCTTTAGCGAGGGTGGGCTAGATTATTTGGGGAACCCGAGCCTGGTCCACGCTCAGAGCATTTTAGCCATTTGGGCTTGTCAAGTTGTGCTAATGGGTGCGGTTGAAGGGTATAGAATTGCGGGGGGGCCATTGGGGGAAATTACTGACCCGATTTACCCAGGTGGGAGCTTTGATCCATTGGGGCTTGCTGATGATCCAGAGGCGTTTGCGGAATTGAAAGTGAAGGAACTTAAGAATGGAAGATTGGCTATGTTTTCGATGTTTGGTTTCTTTGTACAGGCGATTGTGACTGGGAAAGGACCTTTGGAGAATTTGGCTGATCATTTGGCCGATCCTGTTAACAATAATGCTTGGGCTTATGCTACTAACTTTGTACCTGGAAAGTGA 804 53.11 MAASSMALSSPSLAGQAVKLSPTTSDLLGDGRITMRKTAGKPKPISSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 32255880 32256683 - CmPI595203_02g018340.1 Cmu02g1834 409883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g1834 267 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 4 267 IPR001344 GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0009941(PANTHER)|GO:0010287(PANTHER)|GO:0016020(InterPro)
Cmu02g1834 267 MobiDBLite consensus disorder prediction 28 50 - -
Cmu02g1834 267 SUPERFAMILY Chlorophyll a-b binding protein 50 264 - -
Cmu02g1834 267 FunFam Chlorophyll a-b binding protein, chloroplastic 58 260 - -
Cmu02g1834 267 Pfam Chlorophyll A-B binding protein 67 234 IPR022796 -
Cmu02g1834 267 Gene3D Chlorophyll a/b binding protein domain 58 260 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g2380 Cmu-Chr1:35830101 Cmu02g1834 Cmu-Chr2:32255880 3.10E-145 dispersed
Cmu02g0278 Cmu-Chr2:2557272 Cmu02g1834 Cmu-Chr2:32255880 2.90E-120 dispersed
Cmu02g1834 Cmu-Chr2:32255880 Cmu10g1951 Cmu-Chr10:25095395 3.60E-134 dispersed
Cmu08g0181 Cmu-Chr8:3890002 Cmu02g1834 Cmu-Chr2:32255880 6.30E-56 transposed
Cmu11g1896 Cmu-Chr11:30955298 Cmu02g1834 Cmu-Chr2:32255880 3.30E-46 transposed
Cmu01g2379 Cmu-Chr1:35827536 Cmu02g1834 Cmu-Chr2:32255880 2.60E-145 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g1834 K08912 - csv:101213845 540.806