Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g1851 ATGTTTCTCGCAGGAAAGGTCGAAGAAACCCCTCGCCCATTGAAGGATGTTATCATGGTCTCATATGAAATCATCAACAAAAAGGATCCTACTGCAGCCCAGAAGATTAGGCAAAAGGAGGTGTATGAACGGCAAAAAGAGTTAATTTTACTTGGGGAGAGAGTTGTTCTCGCAACTCTTGGTTTTGATCTTAATGTGCACCATCCCTACAAACCCCTTGTCGAGGCAATTAAAAAATTCAAAGTTGCTCAAAATGCCTTGGCTCAGGTAGCTTGGAATTTCGTCAATGATGGATTGCGGACATCTCTTTGCTTGCAATTTAAGCCTCACCATATTGCGGCCGGTGCCATTTTCCTTGCTGCCAAATTTCTCAAAGTTAAACTCCCATCAGATGGGGAAAAGGTGTGGTGGCAAGAGTTTGATGTCACCCCACGGCAATTGGAGGAAGTCAGCAATCAAATGTTAGAACTTTATGAACAAAATCGATTGCCGCCTTCTGGCGAAGCTGATGGAAGCATTGGAGGTGGTCCCACTAATCAAACCCCTACAAAAGCTCCTACCAACAGCGAAGAACGTGCCGTAGCAGACAATCATGCACTTGGTGCAGGTATTGCTACTTCAAGACTTGGAACCTCAAAAGCTGGTTCATCTAGGCCAGCATCTGAACACTCATTTGCAGGTGACCAGCCATCAAGAGCAATGCAGAATCATAGTATTGAAAGTTCGAGCGTAGATTTTAGAAGTCCTTCCAATCACAAAACAGGTAGTGAATCTAAGGTTAGACACGAGATGGAGCCATCGGCTTTCCATGACAAAGGAAACGCTCTAAACTCGGTAAAGCATCAGTCAGAGGGATTGGTTGAGCAAGACCATGGAAATGATATGAAAATAAATGAAGCAACAACAAGGGATGCAATGGAACTGAAAGACAAACATGTAATTCGAAATATAGATTTTAGAGAAGGTACACTTGGCAAATCTCAGGACGTTATCAAAAAAATTGATAAGGACAAAGTAAAGGCTGCGCTTGAGAAACGAAGGAAGTCTCTTGGCAGCATGACCCAGAAAAAAGAATTGATGGATGAGGATGATCTCATTGAAAGGGAGTTGGAAGCTGGTGTTGAGATGGCTGTTGGCAGTGAGAAAAACAAGCGAGAACAGAGGCAAAGTTGGAATAAGTCATCGAATAAACAAGAATATGAGGATTCATATCAAGACAAACATCGAGAGGACGATAAAGACGAGCATCCTCAACGAACGCGACAGTCATTATATAATCTAGATTCTAGCAACATAGAAGAAGGGGAGTTTGCAAATGCTAATGAAGTAGGTTATGGGTATCAAGATTCCCCAAAGTCAAACAGTCGTAAGAGAGGCAGGGAACTCACGGGATAA 1395 42.8 MFLAGKVEETPRPLKDVIMVSYEIINKKDPTAAQKIRQKEVYERQKELILLGERVVLATLGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNRLPPSGEADGSIGGGPTNQTPTKAPTNSEERAVADNHALGAGIATSRLGTSKAGSSRPASEHSFAGDQPSRAMQNHSIESSSVDFRSPSNHKTGSESKVRHEMEPSAFHDKGNALNSVKHQSEGLVEQDHGNDMKINEATTRDAMELKDKHVIRNIDFREGTLGKSQDVIKKIDKDKVKAALEKRRKSLGSMTQKKELMDEDDLIERELEAGVEMAVGSEKNKREQRQSWNKSSNKQEYEDSYQDKHREDDKDEHPQRTRQSLYNLDSSNIEEGEFANANEVGYGYQDSPKSNSRKRGRELTG 464
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 32427165 32429461 - CmPI595203_02g018510.1 Cmu02g1851 409900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g1851 464 SMART cyclin_7 71 156 IPR013763 -
Cmu02g1851 464 MobiDBLite consensus disorder prediction 173 190 - -
Cmu02g1851 464 FunFam Cyclin-T1-5 like 66 170 - -
Cmu02g1851 464 MobiDBLite consensus disorder prediction 208 263 - -
Cmu02g1851 464 CDD CYCLIN_AcCycT_rpt2 67 159 - -
Cmu02g1851 464 Gene3D - 66 166 - -
Cmu02g1851 464 MobiDBLite consensus disorder prediction 162 191 - -
Cmu02g1851 464 MobiDBLite consensus disorder prediction 376 392 - -
Cmu02g1851 464 Pfam Cyclin-T2-like, C-terminal domain 69 156 - -
Cmu02g1851 464 Gene3D - 1 64 - -
Cmu02g1851 464 PANTHER CYCLIN 1 352 IPR043198 GO:0005634(PANTHER)|GO:0006357(InterPro)|GO:0006357(PANTHER)|GO:0008024(PANTHER)|GO:0016538(PANTHER)|GO:0016538(InterPro)|GO:0032786(PANTHER)|GO:0061575(PANTHER)
Cmu02g1851 464 MobiDBLite consensus disorder prediction 376 464 - -
Cmu02g1851 464 SUPERFAMILY Cyclin-like 67 163 IPR036915 -
Cmu02g1851 464 MobiDBLite consensus disorder prediction 209 251 - -
Cmu02g1851 464 MobiDBLite consensus disorder prediction 422 436 - -
Cmu02g1851 464 MobiDBLite consensus disorder prediction 399 421 - -
Cmu02g1851 464 SUPERFAMILY Cyclin-like 1 66 IPR036915 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g0872 Cmu-Chr1:10593177 Cmu02g1851 Cmu-Chr2:32427165 4.30E-115 dispersed
Cmu02g1851 Cmu-Chr2:32427165 Cmu08g1422 Cmu-Chr8:26372495 1.40E-56 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g1851 K15188 - csv:101220862 863.218