Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g1853 ATGCCTATGGCTACTGCACCCTTGAACAAAATTGAGCGAGCCCATCAGATGTACCGTGAAGGGCTTTATGTCGAAGCCCTGAGATTTTACACTGAAGCTCTTGCCATGGCCAAAACCAAGTCCCAGAGGATTGCGCTTCATAGTAACAGAGCTGCTTGCCATTTGAAACTTCATGATTTCAAGAAGGCAGCGGAAGAATGTACATGGGTTCTTGAACTTGATCACAAGCACACTGGAGCTCTAATGCTTCGTGCCCAGACTCTTGTCACACTCAAGGAATACCATTCTGCTCTCTTTGATGTTAACAGACTTATAGAATTGAACCCATCATCAGAAGTTTATCAGAATCTTCACACTCGACTCAAGACGCAATTGTCGCTTGCTCCAATACCTGAATCAGAAGTAGAGCTTGAAGAAGAGGAGGAAGAAGAAGAATGCGCTGTCGAGTTCAGTGCATATGCTGCCAATGAGAAGTGCAATGAGGGAAAAGAAAATGTTGTCGCTTCGAGTATTGCACAGGTACAGAAACCTGAGCATAATTGCAATTTGATTGAAAAGAACATTATCCAGACTACTCAGGGCAACTGTGGATTATCTGAAGAAGAAAGGGGCAATCAGAAAGTTGAGGTGAAAATGAATACTAAAAGTGAAGTTGTTGCTCCTCAAGCACAAAGCAAGAAGGGCACAACTGACCTAGGTCCCAATGGCTGGCAAACAATCCCAAAACCAAAAGGTCACTCAGCTTTAGACTATGCACGTTGGGATAGAGTTGAGGATGATTCTAGTGAAGATGATGATGACGATGAAGAAGAAGACTCAGGACCTCAATTCCGTTTTCGTGTTAGAACTGTTGGTGTTAAACCTGTGAAATGA 873 43.3 MPMATAPLNKIERAHQMYREGLYVEALRFYTEALAMAKTKSQRIALHSNRAACHLKLHDFKKAAEECTWVLELDHKHTGALMLRAQTLVTLKEYHSALFDVNRLIELNPSSEVYQNLHTRLKTQLSLAPIPESEVELEEEEEEEECAVEFSAYAANEKCNEGKENVVASSIAQVQKPEHNCNLIEKNIIQTTQGNCGLSEEERGNQKVEVKMNTKSEVVAPQAQSKKGTTDLGPNGWQTIPKPKGHSALDYARWDRVEDDSSEDDDDDEEEDSGPQFRFRVRTVGVKPVK 290
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 32445592 32447044 - CmPI595203_02g018530.1 Cmu02g1853 409902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g1853 290 SMART tpr_5 44 77 IPR019734 GO:0005515(InterPro)
Cmu02g1853 290 SMART tpr_5 78 111 IPR019734 GO:0005515(InterPro)
Cmu02g1853 290 SMART tpr_5 7 40 IPR019734 GO:0005515(InterPro)
Cmu02g1853 290 Gene3D Tetratricopeptide repeat domain 3 129 IPR011990 GO:0005515(InterPro)
Cmu02g1853 290 MobiDBLite consensus disorder prediction 215 290 - -
Cmu02g1853 290 MobiDBLite consensus disorder prediction 217 236 - -
Cmu02g1853 290 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 3 290 - -
Cmu02g1853 290 SUPERFAMILY TPR-like 11 121 IPR011990 GO:0005515(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g1853 - - - 0.0