Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g1869 ATGAGTTCGAACACCGCGTCTAGCTCCGGAGGTCCGGGATCGAACGATTCATCATCAAATAGAAGGAATTCGAAGCGACCTAAATATTCGAGGTTTACCCAGCAGGAACTTCCAGCGTGTAAACCCATTCTCACACCAAGATGGGTGATTTCTGCATTCATGTTAGTTAGCATTATCTTTGTTCCCATTGGAGTTGCTTCCTTGTTTGCTTCCAGAGATGTCGTTGAAATAATTGATCGTTATGAAACTGAGTGCATACCAGAACAATTTAGAAACGATAAGGTTGGGTTCATACAGGGCCCTGCAGTTAAAACTTGCCGCAGAAACATAACTGTGCCGAAACGTATGAAACAACCAATATATGTTTATTACCAGCTTGACAATTTCTACCAGAACCACCGCAGATACGTGCAGAGCCGTAGTGATAAGCAATTGAGAGATGCTGGCAGCGCGCATGATACAAGCTCTTGCAAGCCCGAAGACAATGTGAATGGGCAGCCAATCGTTCCCTGTGGTTTGATAGCATGGAGTTTGTTTAATGATACTTATAACTTCACCCTTAACAAGAAGCAAGTCGATGTGAATAAGGTCGGTATTTCATGGAAGAGTGACCGGGAACATAAATTCGGCAAGAATGTATTTCCCAAGAACTTTCAAAATGGTACACTGAAAGGAGGCAAAACCCTTGATGCAGACAAACCATTGAGTCAACAGGAGGACCTTATTGTGTGGATGCGAACTGCTGCTCTTCCCACATTCAGAAAGTTATATGGAAAGATAGAGGTCGACCTTGAGAAAAATGATGTAATAGATGTGGTTTTGGAGAACAATTATAACACTTACAGTTTTAACGGCAAGAAAAAGCTTGTGCTTTCTACAACTAGCTGGCTTGGTGGGAAGAATGATTTTCTTGGAATTGCTTATCTTACTGTTGGTGGGTTATGCTTCTTTTTGGCAATGGCTTTCACAGTCGTCTATCTTGTTAAGCCAAGGCGACTTGGGGACCCGTCATATCTGTCATGGAATAGAAACCCAGGTGGCCACTGA 1047 42.79 MSSNTASSSGGPGSNDSSSNRRNSKRPKYSRFTQQELPACKPILTPRWVISAFMLVSIIFVPIGVASLFASRDVVEIIDRYETECIPEQFRNDKVGFIQGPAVKTCRRNITVPKRMKQPIYVYYQLDNFYQNHRRYVQSRSDKQLRDAGSAHDTSSCKPEDNVNGQPIVPCGLIAWSLFNDTYNFTLNKKQVDVNKVGISWKSDREHKFGKNVFPKNFQNGTLKGGKTLDADKPLSQQEDLIVWMRTAALPTFRKLYGKIEVDLEKNDVIDVVLENNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLAMAFTVVYLVKPRRLGDPSYLSWNRNPGGH 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 32608566 32611195 - CmPI595203_02g018690.1 Cmu02g1869 409918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g1869 348 PIRSF Lem3/Cdc50 1 344 IPR005045 GO:0016020(InterPro)
Cmu02g1869 348 MobiDBLite consensus disorder prediction 1 31 - -
Cmu02g1869 348 MobiDBLite consensus disorder prediction 141 161 - -
Cmu02g1869 348 PANTHER CELL CYCLE CONTROL PROTEIN 50 17 340 IPR005045 GO:0005783(PANTHER)|GO:0005794(PANTHER)|GO:0005886(PANTHER)|GO:0016020(InterPro)
Cmu02g1869 348 MobiDBLite consensus disorder prediction 1 20 - -
Cmu02g1869 348 Pfam LEM3 (ligand-effect modulator 3) family / CDC50 family 68 332 IPR005045 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g2422 Cmu-Chr1:36160603 Cmu02g1869 Cmu-Chr2:32608566 7.80E-110 dispersed
Cmu02g1869 Cmu-Chr2:32608566 Cmu05g1159 Cmu-Chr5:11131594 3.60E-126 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g1869 K26935 - csv:101216400 639.032