Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g1870 ATGACTATGACGGTCGCTGCAAGAGCAATCGCTGCAGCTCGATCAATGGCGCGATCGAGCAGTTTCCCTCTAAAATCTCCATCTTCTTATGTGTTCGCTGCGCAGAAATCTCACTCCCACACTCTTCTCATTCGTCAGATGAGCTCGGAGGCGCAGAGCATCGCTACTCGTCTTCACAGTTCTGGATTGTTACGAAGCCAAGGCCTCATTGGAGGGAAGTGGATTGATGCTTATGATGGGAAGACCATTGAGGTTCACAATCCAGCTAATGGTGAAGTTATAACCAATGTCCCGCTCATGGGCAAAAGGGAGACCGATGATGCTATTTCTTCAGCTTATGATGCTTTTAAGTCTTGGAGCAAGCTCACTGCAGCTGATCGGAGTAATCGCTTACGCAAATGGTATGAGCTCCTAATTGCCCACAAAGAAGAGATTGGACAACTGATAACCTTAGAGCAAGGCAAACCCTTAAAGGAAGCTGTGGGTGAGACTAACTATGGAGCCAGCTTTATTGAGTTCTATTCTGAGGAAGCAAAACGGATATATGGTGACATAATTTCACCAACTATGGCCGATCGTCGAATTTTGGTCTTGAAGCAGCCAGTTGGAGTTGTTGGTGTTGTTACCCCTTGGAACTTTCCGTTGGCTATGATTACGCGGAAGGTTGGACCTGCTCTTGCATGTGGTTGTACGGTGGTCATAAAACCCTCTGAGCTTACCCCCTTGACAGCTTTAGCAGCAGCCGAGCTCTCACTTCAAGCTGGAATTCCCCCAGGTGTTGTGAATGTGGTTATGGGAGATGCTCCTGCTATTGGCGATGCTATACTCGCAAGTTCTCAGGTAAGAAAGATCACGTTTACTGGCTCAACAGCAGTTGGAAAAAAGTTGATGGCAGGAGCTGCTGGAACTGTTAAAAGGGTGTCCTTTGAACTTGGTGGTAATGCCCCTTGCATAGTATTTGATGACGCAGATGTGGATGTTGCAGTAAAAGGAGCTGATTATGGCTTTGAAACAATCCTGCTCAACATGATTAATGTAATTAGCACTTACCATGATGCATCAATATCTACTTGTAAGTGCATACTACCTAGGGATGTGGGTCTATTCAACCACGACTCTTTCCTGCAATTGCAGCAAAGTTCCGAAATAGTGGACAGACTTGTGTTTGTGCCAATAGAATTCTTGTTCAAGAAGGTATTAACAGATGTATACTTCAGTTCTGAAGGATGCTTCTTTTGCTCGTTTAAAAGATGGCTTACTGATATTGGAATCTACGAGAAATTTACAAATGCTTTCTCAAAAGCTGTGCAAAATCTGCAAGTTGGTGATGGGTTTGGTGAAGGTGTAGCTCAGGGTCCTTTAATTAATGAAGCCGCCGTGCAGAAGGTTGAGAAATTTCTTCAAGATGCCACTACAAAGGGAGCAAAAGTTCTTCTTGGTGGTAAAAGACACAGCCTTGGGATGACATTTTTTGAGCCTACAGTTATTGCTGACGTGAATAGTGACATGCTTGTATCCAGGGAGGAAGTATTTGGTCCCGTGGCACCCTTACTGCAATTCAGAACAGAGGAGGAAGCAATTGCTCTCGCTAATGACACCAATGCAGGATTAGCTGCTTACATATTCACAAATAATATTCAACGTTCATGGAGAGTGACTGAAGCTCTTGAATACGGAATGGTTGGTGTTAATGAAGGCCTAATTTCTACAGAGGTGGCTCCATTTGGTGGCGTTAAGGAGTCAGGCCTTGGAAGGGAAGGGTCGAAATATGGGATGGACGAGTATCTTGAGCTGAAATATGTTTGCTTGGGGAATATGGACCGCCATTGA 1830 44.75 MTMTVAARAIAAARSMARSSSFPLKSPSSYVFAAQKSHSHTLLIRQMSSEAQSIATRLHSSGLLRSQGLIGGKWIDAYDGKTIEVHNPANGEVITNVPLMGKRETDDAISSAYDAFKSWSKLTAADRSNRLRKWYELLIAHKEEIGQLITLEQGKPLKEAVGETNYGASFIEFYSEEAKRIYGDIISPTMADRRILVLKQPVGVVGVVTPWNFPLAMITRKVGPALACGCTVVIKPSELTPLTALAAAELSLQAGIPPGVVNVVMGDAPAIGDAILASSQVRKITFTGSTAVGKKLMAGAAGTVKRVSFELGGNAPCIVFDDADVDVAVKGADYGFETILLNMINVISTYHDASISTCKCILPRDVGLFNHDSFLQLQQSSEIVDRLVFVPIEFLFKKVLTDVYFSSEGCFFCSFKRWLTDIGIYEKFTNAFSKAVQNLQVGDGFGEGVAQGPLINEAAVQKVEKFLQDATTKGAKVLLGGKRHSLGMTFFEPTVIADVNSDMLVSREEVFGPVAPLLQFRTEEEAIALANDTNAGLAAYIFTNNIQRSWRVTEALEYGMVGVNEGLISTEVAPFGGVKESGLGREGSKYGMDEYLELKYVCLGNMDRH 609
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 32618830 32629675 + CmPI595203_02g018700.1 Cmu02g1870 409919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g1870 609 CDD ALDH_F5_SSADH_GabD 85 603 - -
Cmu02g1870 609 FunFam Succinate-semialdehyde dehydrogenase I 80 337 - -
Cmu02g1870 609 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 58 606 IPR050740 GO:0004777(PANTHER)|GO:0006807(PANTHER)|GO:0009450(PANTHER)
Cmu02g1870 609 Pfam Aldehyde dehydrogenase family 405 601 IPR015590 GO:0016491(InterPro)
Cmu02g1870 609 Pfam Aldehyde dehydrogenase family 74 332 IPR015590 GO:0016491(InterPro)
Cmu02g1870 609 FunFam Succinate-semialdehyde dehydrogenase I 393 570 - -
Cmu02g1870 609 FunFam Aldehyde dehydrogenase, putative 573 599 - -
Cmu02g1870 609 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 383 607 IPR016163 GO:0016620(InterPro)
Cmu02g1870 609 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 57 349 IPR016162 GO:0016491(InterPro)
Cmu02g1870 609 SUPERFAMILY ALDH-like 104 605 IPR016161 GO:0016491(InterPro)
Cmu02g1870 609 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 309 316 IPR029510 GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g1870 Cmu-Chr2:32618830 Cmu06g1740 Cmu-Chr6:28374396 2.60E-79 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g1870 - - - 0.0