Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g1910 ATGGTTGTAGCTTTAGCAATAACTTTATTGGCGGTATTCATTGGGAGCTCTTCAGCTCAGCTCTCTCCCAACTTCTACTACGATAGTTGCCCCAAGTTGTTCAGTACCGTTAGAGCCGGTATCCATTCCGCCGTCGCTCAAGAAGCTCGCATGGGTGCTTCCCTCCTTCGCCTTCACTTTCATGATTGTTTCGTTAACGGTTGTGATGGATCAATTCTTCTAGAAGACACTCCTACGTTTACAGGAGAGCAAACAGCAGCTCCCAACAACAATTCTGTTAGAGGGTTCAACGTGATTGAAAGCATAAAGAAAAATGTTGAAAAAGTTTGCCCTGGCGTCGTCTCTTGTGCTGATATTTTAACTCTTTCAGCTCGTGACTCTGTTGTAGTGCTTGGAGGCCCAAGTTGGAAGGTAAAATTAGGAAGAAGAGATTCTAAAACAGCCAGCTTCTCCGATGTCACTGGTGCTATTCCCCCGCCAACCTCGACCCTCAACACCCTTATCAACCGATTCAACACCAAAGGCCTCTCCCCTCGGGACTTGGTTGCCTTATCCGGTGCGCACACGATAGGTCTAGCAAGGTGTATATCCTTTAGGAATCGTATATACAATGAGAGCAACATAGACGCTTCATTCGCAAAGCTAAGACAGAGGAATTGCCCAAGAAGTGGAGGAGATGACAATCTTACCCCTCTAGACGTTGCTACCCCAAAGCTTTTCGACAACCATTACTACAAGAATCTTTTGAACAAAAAGGGGTTGCTCCACTCCGATCAAATCCTCCACAACGGCGGATCCACTGATTCCTTAGTCAAACAGTATAGTCAAAATGATAAGACTTTCGACGCCGATTTCGTGGCAGCAATGATTAAAATGGGAGACATCCGACCACTCACCGGATCACAAGGCGAGATCAGAAAGGTCTGCAGCAGACCCAACTAA 942 46.28 MVVALAITLLAVFIGSSSAQLSPNFYYDSCPKLFSTVRAGIHSAVAQEARMGASLLRLHFHDCFVNGCDGSILLEDTPTFTGEQTAAPNNNSVRGFNVIESIKKNVEKVCPGVVSCADILTLSARDSVVVLGGPSWKVKLGRRDSKTASFSDVTGAIPPPTSTLNTLINRFNTKGLSPRDLVALSGAHTIGLARCISFRNRIYNESNIDASFAKLRQRNCPRSGGDDNLTPLDVATPKLFDNHYYKNLLNKKGLLHSDQILHNGGSTDSLVKQYSQNDKTFDADFVAAMIKMGDIRPLTGSQGEIRKVCSRPN 313
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 33009472 33026632 - CmPI595203_02g019100.1 Cmu02g1910 409959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g1910 313 Pfam Peroxidase 37 277 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1910 313 ProSiteProfiles Plant heme peroxidase family profile. 20 313 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1910 313 Gene3D - 24 310 - -
Cmu02g1910 313 PANTHER PEROXIDASE 72-RELATED 10 311 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1910 313 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Cmu02g1910 313 ProSitePatterns Peroxidases active site signature. 52 63 IPR019794 GO:0004601(InterPro)
Cmu02g1910 313 Gene3D Peroxidase, domain 2 158 292 - -
Cmu02g1910 313 FunFam Peroxidase 24 166 - -
Cmu02g1910 313 SUPERFAMILY Heme-dependent peroxidases 20 313 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1910 313 CDD secretory_peroxidase 20 311 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cmu02g1910 313 FunFam Peroxidase 158 292 - -
Cmu02g1910 313 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1910 313 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1910 313 PRINTS Plant peroxidase signature 287 300 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1910 313 PRINTS Plant peroxidase signature 247 264 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1910 313 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1910 313 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1910 313 PRINTS Plant peroxidase signature 231 246 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1910 313 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1910 313 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1910 313 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1910 313 PRINTS Haem peroxidase superfamily signature 233 248 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1910 313 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1910 313 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1910 313 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g1910 Cmu-Chr2:33009472 Cmu11g0585 Cmu-Chr11:6426450 4.50E-112 dispersed
Cmu02g1910 Cmu-Chr2:33009472 Cmu02g1911 Cmu-Chr2:33033037 2.50E-94 tandem
Cmu09g1476 Cmu-Chr9:26503243 Cmu02g1910 Cmu-Chr2:33009472 3.40E-57 transposed
Cmu02g1910 Cmu-Chr2:33009472 Cmu03g0648 Cmu-Chr3:720534 5.60E-94 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g1910 K00430 - csv:101204245 531.561