Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g1911 ATGAATTCTTCGTCGGGGCCATCACGGCCGGACCTCCCCGTAGCACCTAATCGCGGGAAGTTTCAATCGGAGACGGAGAGATTGAGCTCCGACGTTGGTGGACTGGAAGGTTCATTGCTTCAGATGGTTAATGATCACCACTACGCCTCTCTCAAGCTCAGGGAAAACTCCGAGAAAGCGAAGAAAGATGCTATACAGAAGGCGGTGCGCGTTTCGGATCTTTTAGTCGATGCCGTGAATGGTGGAGTTCAGGAATCTTTTGTCAATCAGAAGTTGATTGAGCTCGAAATTAGGGCTTTAGCGACTACGATTGCCCGATTTACGAAGCAGACCGATCAATGGCTTGCCGCCACTCACGCTTTGAACACTGCCGTTAAGGAAATTGGAGATTTTGAGAACTGGATAAAGACCATCGATTTCGATTCTCTCAGTTTTGGATTTGTAGAATACTCATTTCGACTTCTGAGGCCAAGTCATAGAACAAGTGGAGAAGAAGTAAAGCTAATAATAGCTCCAATGGCATCCCTTGGCCCTCTTTTGCTATGTTTTATTGTTTTATCAGCTGCCCTAAGCCATAGCCATGCACAGCTAACTCCAAACTTTTACAATAAAGTCTGTCCTAAGGCTTTGTCCACCATCAAATCCGTGGTCAAGAACGCCATTAGACGTGAGCCTCGAATGGGAGCTTCCCTCTTACGTCTCCATTTCCATGATTGCTTTGTCAATGGGTGTGACGGATCCGTATTGTTGGATGATACTGCTACTTTTATGGGAGAAAAGACTGCATTTCCTAATGTTAACTCGATTAGAGGATTTGAAGTTGTTGACAAGATTAAGACACAAGTGAATAAAGTTTGCAAAGGAAATGTCGTGTCTTGTGCTGATATTTTAGCAGTTGCAGCTCGTGACTCCGTTGCTATTCTTGGAGGACCAAACTACAAAGTATTAGTAGGAAGAAGAGACGCAAGAAGAGCGAGTGCAGAAGATGCCAATAGAAATCTCCCTCCGCCATTTTTCAGCTTCACACAACTTCTATCCAACTTCCAATCTCATGGCCTAAACCTTAAGGACCTCGTCGTCTTGTCAGCCGGCCACACTCTCGGGTATGCTCGGTGCACCAATTTTCGAACTAGGATATACAACGACACCAACATCAACCCGAAATTCGCAGGGGTATTGAAGGGAAAGTGCCCACAGAGTGGGGGCGATGACAATCTGAAGGGGCTTGACATGACTCCAAATTTCTTTGACAATGCTTACTTCAAGGCTTTGTTGACAAACAATGGCCTTCTACATTCTGACCAGGAACTGTTCGGTGGCGGCAACAACGACAGCGATGGTTTGGTGAAGTATTATAGCAGATATCCAATTGCCTTTAGAAATGATTTTGGTTCTTCCATGATCAAAATGGGGAATATGAACCCACTTACAGGAAGTAATGGAGAAATCAGAGCCAATTGCAGGCTTGTCAATTGA 1476 44.99 MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDSLSFGFVEYSFRLLRPSHRTSGEEVKLIIAPMASLGPLLLCFIVLSAALSHSHAQLTPNFYNKVCPKALSTIKSVVKNAIRREPRMGASLLRLHFHDCFVNGCDGSVLLDDTATFMGEKTAFPNVNSIRGFEVVDKIKTQVNKVCKGNVVSCADILAVAARDSVAILGGPNYKVLVGRRDARRASAEDANRNLPPPFFSFTQLLSNFQSHGLNLKDLVVLSAGHTLGYARCTNFRTRIYNDTNINPKFAGVLKGKCPQSGGDDNLKGLDMTPNFFDNAYFKALLTNNGLLHSDQELFGGGNNDSDGLVKYYSRYPIAFRNDFGSSMIKMGNMNPLTGSNGEIRANCRLVN 491
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 33033037 33041893 + CmPI595203_02g019110.1 Cmu02g1911 409960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g1911 491 FunFam Peroxidase 200 339 - -
Cmu02g1911 491 PRINTS Plant peroxidase signature 356 368 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1911 491 PRINTS Plant peroxidase signature 290 300 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1911 491 PRINTS Plant peroxidase signature 423 440 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1911 491 PRINTS Plant peroxidase signature 309 324 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1911 491 PRINTS Plant peroxidase signature 407 422 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1911 491 PRINTS Plant peroxidase signature 206 225 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1911 491 PRINTS Plant peroxidase signature 230 250 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1911 491 PRINTS Plant peroxidase signature 270 283 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1911 491 PRINTS Plant peroxidase signature 465 478 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1911 491 ProSiteProfiles Plant heme peroxidase family profile. 196 491 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1911 491 CDD secretory_peroxidase 196 490 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cmu02g1911 491 FunFam Peroxidase 335 470 - -
Cmu02g1911 491 SUPERFAMILY Heme-dependent peroxidases 196 491 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1911 491 ProSitePatterns Peroxidases active site signature. 228 239 IPR019794 GO:0004601(InterPro)
Cmu02g1911 491 Gene3D - 200 488 - -
Cmu02g1911 491 Gene3D Peroxidase, domain 2 335 470 - -
Cmu02g1911 491 PRINTS Haem peroxidase superfamily signature 309 321 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1911 491 PRINTS Haem peroxidase superfamily signature 228 242 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1911 491 PRINTS Haem peroxidase superfamily signature 357 372 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1911 491 PRINTS Haem peroxidase superfamily signature 291 308 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1911 491 PRINTS Haem peroxidase superfamily signature 409 424 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1911 491 ProSitePatterns Peroxidases proximal heme-ligand signature. 357 367 IPR019793 -
Cmu02g1911 491 PANTHER PEROXIDASE 72-RELATED 184 489 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1911 491 Pfam Peroxidase 214 452 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1911 491 Pfam GCN5-like protein 1 (GCN5L1) 42 141 - -
Cmu02g1911 491 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g1911 Cmu-Chr2:33033037 Cmu11g0585 Cmu-Chr11:6426450 1.50E-93 dispersed
Cmu02g1910 Cmu-Chr2:33009472 Cmu02g1911 Cmu-Chr2:33033037 2.50E-94 tandem
Cmu02g1911 Cmu-Chr2:33033037 Cmu02g1912 Cmu-Chr2:33047373 3.40E-170 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g1911 K00430 - csv:101204979 560.451