Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g1912 ATGGCATCCCTTCACTCTCTTTTGCTTTGTGTTTTTGTTTTATCAGCTGCCCTAAGCCATAGCCATGCACAGCTGACTCCAAACTTTTACAACAATGTCTGCCCCATGGCCTTGCCCACCATCAAATCCGTCGTCTCGAGCGCCATCAAACGTGAGCCTCGAATGGGAGCTTCCCTCTTACGTCTCCATTTCCATGATTGTTTTGTCAATGGGTGTGACGGATCCGTGTTGTTGGATGATACTGCTACTTTCACGGGAGAAAAGACTGCATTTCCTAATGTTAACTCGATTAGAGGATTTGAAGTTGTTGACAAGATTAAGACACAAGTGAATAAAGTTTGCAAAGGAAATGTCGTGTCTTGTGCTGACATTTTAGCAGTTGCTGCTCGTGACTCCGTTGCTATTCTCGGAGGGCCAAACTACAAAGTATTAGTAGGAAGAAGAGACGCAAAAAGCGCGAGTGCAGACGATGCCAATGGAAATCTCCCTCCACCATTTTTCAACTTCACACAACTTCTATCCAACTTCCAATCTCATGGCCTCAACCTCAAGGACCTCGTCGTCTTGTCAGCCGGCCACACTCTCGGGTACTCCCGATGCACCAATTTTCGAACCAGGATATATAACGACACCAACATTGACCCGAAATTTGCAGCAGCATTACAAGGCAACTGCCCACAGAGCGGGGGCGATGACAATCTGAGGAGCCTTGATATGACTCCAAATTTCTTTGACAATGCTTACTTCAAGGCTTTGTTGACAAACAAGGGCCTTTTACATTCCGACCAGGAACTGTTCGGTGGCGGCAACAGCGACAGCGATGGTTTGGTGAAGTATTATAGCAGATATCCAATTGCCTTTAGAAATGATTTTGGTTCTTCCATGATCAAAATGGGGAATATGAACCCACTTACAGGAAGTAATGGAGAAATCAGAGCCAATTGCAGGCTTGTCAATTGA 960 45.52 MASLHSLLLCVFVLSAALSHSHAQLTPNFYNNVCPMALPTIKSVVSSAIKREPRMGASLLRLHFHDCFVNGCDGSVLLDDTATFTGEKTAFPNVNSIRGFEVVDKIKTQVNKVCKGNVVSCADILAVAARDSVAILGGPNYKVLVGRRDAKSASADDANGNLPPPFFNFTQLLSNFQSHGLNLKDLVVLSAGHTLGYSRCTNFRTRIYNDTNIDPKFAAALQGNCPQSGGDDNLRSLDMTPNFFDNAYFKALLTNKGLLHSDQELFGGGNSDSDGLVKYYSRYPIAFRNDFGSSMIKMGNMNPLTGSNGEIRANCRLVN 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 33047373 33048669 + CmPI595203_02g019120.1 Cmu02g1912 409961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g1912 319 Gene3D Peroxidase, domain 2 163 298 - -
Cmu02g1912 319 FunFam Peroxidase 28 168 - -
Cmu02g1912 319 Pfam Peroxidase 42 280 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1912 319 PRINTS Plant peroxidase signature 251 268 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1912 319 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1912 319 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1912 319 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1912 319 PRINTS Plant peroxidase signature 235 250 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1912 319 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1912 319 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1912 319 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1912 319 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1912 319 Gene3D - 28 316 - -
Cmu02g1912 319 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1912 319 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1912 319 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1912 319 PRINTS Haem peroxidase superfamily signature 237 252 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1912 319 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1912 319 CDD secretory_peroxidase 24 318 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cmu02g1912 319 SUPERFAMILY Heme-dependent peroxidases 24 319 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1912 319 FunFam Peroxidase 163 298 - -
Cmu02g1912 319 PANTHER PEROXIDASE 72-RELATED 10 317 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g1912 319 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601(InterPro)
Cmu02g1912 319 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Cmu02g1912 319 ProSiteProfiles Plant heme peroxidase family profile. 24 319 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g1912 Cmu-Chr2:33047373 Cmu11g0585 Cmu-Chr11:6426450 1.80E-95 dispersed
Cmu02g1911 Cmu-Chr2:33033037 Cmu02g1912 Cmu-Chr2:33047373 3.40E-170 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g1912 K00430 - csv:101204979 561.992