Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g1966 ATGGCGCCAATTCCCAGATCTCTCTCCCACAAATTCTTCTTCCTTTTACTCCTCATTCTCCACGTCGGCTGCTTCCTTCTTACCACCGCCGACCACCGTCGCCGCCGCCACCACCGTCCTACTCCCTCCTGTTTGAAGCCACACAAACTCAAATCCCTAGCTTCCTCTTTTTCATTTCTCAAACGAATCTTCTCTTCCAAGACTTGCAAAATGGCAATCGAAACCGCTCGCTCGCCTTCCACTCCCGCTAGGTCATCGCAGCACTCCATCGTCACGCTCATCCAACAGGAGATTCCTCCTCCGCCGATTCCGGAGACTCATCCTCCAACCGGAACGCCGCAGGATTCAGATATCACTACGGCAGAGCCGAATCAATCTTTTCCTCTTCGAAACGATATCTTCCCCTGTACTGCTTGTGGCGAGATTTTTCCCAAAGCGCAACTCCTCGAACAGCATCAATCGATTAAACACGCTGTGTCGGAGCTTGCTGATTCGGATTCTGGAAAGAATATTGTTCGGATTATTTTCGAAACTGGATGGACGAGTAGAGAAAAAAGCCCTAAAATCCTTCGAATCTTGAAAATCCACAATAGTCAGAAGATTCTTTCCAGATTTGAAGAGTATAGAGAGACGGTGAAGGCGAAAGCGGCTATACACGGCGGCGTAAAGCGGCGGGATGAGCGGTGCATTGCCGACGGGAACGAGCTTCTGAGGTTTCATTGTTCGACGTTTTTATGCGATTTGGGGCAAAATGGTAATTCCAGTCTTTGCGGGCAGCAATTTTGTAGTATTTGTGGGATAATTAAATCGGGATTCTCACACAAGTTGGATGGAATTTCGACACTATCGAGTAGCTGGAGGGCACACGTGGCGATCCCTGAGGACATCGAAGAGGAGTTCAAGTTTCTGAATGCGAAGCGGGCGATTTTGGTTTGTCGGGTTGTGGCGGGTCGGGTCGGCTCAGACGCCGATGAGCCGGAAAAAGACGGCGGAGGGTTTGACTCCGTCGTTGGGAGGAGTGGGAGTGGGGCCCAGACCACGTTGGATGAAGAAGAGCTGTTGGTTTTCAATCCGAGGGCTGTGCTCCCCTGCTTCGCGATTGTATACGAAATCTAA 1116 50.54 MAPIPRSLSHKFFFLLLLILHVGCFLLTTADHRRRRHHRPTPSCLKPHKLKSLASSFSFLKRIFSSKTCKMAIETARSPSTPARSSQHSIVTLIQQEIPPPPIPETHPPTGTPQDSDITTAEPNQSFPLRNDIFPCTACGEIFPKAQLLEQHQSIKHAVSELADSDSGKNIVRIIFETGWTSREKSPKILRILKIHNSQKILSRFEEYRETVKAKAAIHGGVKRRDERCIADGNELLRFHCSTFLCDLGQNGNSSLCGQQFCSICGIIKSGFSHKLDGISTLSSSWRAHVAIPEDIEEEFKFLNAKRAILVCRVVAGRVGSDADEPEKDGGGFDSVVGRSGSGAQTTLDEEELLVFNPRAVLPCFAIVYEI 371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 33469953 33471068 - CmPI595203_02g019660.1 Cmu02g1966 410015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g1966 371 MobiDBLite consensus disorder prediction 110 124 - -
Cmu02g1966 371 SUPERFAMILY ADP-ribosylation 160 370 - -
Cmu02g1966 371 ProSitePatterns Zinc finger C2H2 type domain signature. 136 157 IPR013087 -
Cmu02g1966 371 Gene3D - 158 370 - -
Cmu02g1966 371 MobiDBLite consensus disorder prediction 98 124 - -
Cmu02g1966 371 ProSiteProfiles Zinc finger C2H2 type domain profile. 134 162 IPR013087 -
Cmu02g1966 371 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 58 369 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g0376 Cmu-Chr1:3963360 Cmu02g1966 Cmu-Chr2:33469953 1.70E-28 dispersed
Cmu02g1966 Cmu-Chr2:33469953 Cmu05g1879 Cmu-Chr5:28737487 3.30E-53 dispersed
Cmu02g1966 Cmu-Chr2:33469953 Cmu10g1426 Cmu-Chr10:8413230 1.30E-46 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
5813 None None None None Cmu TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g1966 - - - 0.0