Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g1999 ATGCCTTATCGTCATTCTCAATCAGTCTGTTTCCAGGAAAGAACTGGAAATCATAATTTCAACTTTATAAACCTAATAACTCACCGCCTGATTCACCCCCTTCTCCATCGCTTGCTTTTCCCCTGTTTCTACCTCAGCTTCATTCTTGGATTCTGTTTCTATTTGGAGGCTTACATAACTATGGATCACCCAAATCTTAACGATTTCCCAGTTCGTGGAATTGATTATCAAACCCCTTTAACCCAATTTCACGATCAAACTTCTTTACCCACTTCATATCTATACCCAGAATTCGAAAACAGTTTTGTATTCAACAACCCATCTCCAGATCTTGTTCCTTTCGTCGACCCCAACGGTTCTTCAGCGGCGGAGTTGAAATTAAGCGAAGGTGTGGGTTCTTCAGGGCGAAGCCCTGGTGGCGATTCTTCCTCAGATGAGAGTGATTTCAGGGAAAGTGTTCTCAAGTACATAAGCCAAATGCTTATGGAAGAGAATTTGGAAGAGAAGCCTTGTATGTTTTATGATCCCTTGGGCCTTGAAGTTACCGAGAAATCATTCTATGATGCTCTTGTTAAGAATTACCCTCCTTCTCCTAACCAACCTCCCCTCTTGGATTGTGACAGTGATCTTGCTAGTACTACTCTTAGTGTTCCCAATACCAATTCACCTGACTCCCAATGGGTTGTTGATCCTGGAGAACATAAATCCTCTGTACTTCCAAACCCTGTTCTTAGTAGTCATGAGCTTGTCAATGAGTTGTTGGCTCATAATATCTTTAGTGATAGCACATCTATATTGCAATATCAAAAGGGGTTGGAGGAGGCAAGGAAGTTTCTTCCAGTGGGTACCCAGTTGAATATTGATCTTGGCAGTAGCATGGTACCAGGAGTAGTTTCTAAGACGGAGAATTCGCCGAATGGATCGAAGCGAAGGAAGAGTCGTGAACGTGAAGATGTGGACTTGGATTCAGAAGAAGGGAGGAGAAACAAGCATTCAACCATTTCTGTGGATGAGGAAGAATTATCCGAGATGTTTGATAAGGTTTTACTTCATGATTGTGGAAATGAGACTACTGCAAATGGTGGGCGTGAAAATTTGCAGTATAACGGTCAACTTCATGGATCGATTACTTCAAAAGCTCGGGAAAAGAAACAGGAGAAGAGAAAAGACTCTGTGGATTTGAGAAATCTTCTGATATTATGCGCACAAGCTGTGTCTTCTGATGATCGTCGGATTGCGTATGAACTGCTTAAGCAGATTAGGCAGCATTCTACAATCATTGGGGATGGTTTTCAAAGAATGGCTCATTTCTTTGCTAATGCTCTTGAGGCTCGTATGGTTGGGACTGGCACAGGAAGTAGAATCTACTATGAATCATTAGCTCAAAGCAAAATTTCAGCTGCTGATATGTTGAAAGCTTACCAAGCTCACTTATCATCCTGCCCTTTTAAGAAGCTCTCACTCTTTTTCATGATTAAAATGATTTTGAAGGTTGCTGAGAATGCTAAAAGTCTTCATGTTATTGATTTTGGCATTTGTTATGGTTTCTTATGGCCAATGTTAATTCAGTTTCTTGCACAACTACCTGATGGTCCTCCCAATCTACGCATTACCGGTATAGATCATCCTCTACCAGGATTTCGTCCAGCAGAAAAGATCGTCGAGTCAGGCCGTCGTTTGGAAAAATACTGTGAGCGGTTTAATGTTCCTTTTCAATATCAAGCCATACCATCAAATAACTGGGAAACTATCCGAGTTGAGGACTTAAAGCTCGATAGCAATGATGTGCTTGTTGTGAACTGTTTCTACAGGTTTAACAACCTACTTGACGAAACTGTTGAAGAAAGTAGTCCACGGGACGCTGTTCTTCGTTTAATAAGAAAGATGAATCCAAACATCTTTGTACATTCTGTGGTTAATGGATCCTACCATGCACCATTCTTCATAACACGATTCAGGGAAGCACTCTTCCATTTCTCTGCATTATATGATGCTCTAGACGTTAATTTACCTCGTGACAGCGATGAGAGGATGATGCTAGAGAGAGAGTTTCTCGGTCGCCAAATTATGAACGTCGTAGCATGTGAGGGTGTCCAAAGGGTTGAGAGGCCTGAAACCTATAAGCAATGGCAGGTTAGATGTATGAGGGCAGGTTTCAAGCAACTTCCTTTAGACAAAGAGATCATGAACAAGTTTAGGAGCAAACTAACGTCCTATTACCACAAAGATTTTGTACTAGATGAAGATGAGGGTTGGATGCTTCAAGGATGGAAAGGTCGGATCGTCTATGCTTCTTGTTGCTGGGTACCAGCATAG 2316 41.62 MPYRHSQSVCFQERTGNHNFNFINLITHRLIHPLLHRLLFPCFYLSFILGFCFYLEAYITMDHPNLNDFPVRGIDYQTPLTQFHDQTSLPTSYLYPEFENSFVFNNPSPDLVPFVDPNGSSAAELKLSEGVGSSGRSPGGDSSSDESDFRESVLKYISQMLMEENLEEKPCMFYDPLGLEVTEKSFYDALVKNYPPSPNQPPLLDCDSDLASTTLSVPNTNSPDSQWVVDPGEHKSSVLPNPVLSSHELVNELLAHNIFSDSTSILQYQKGLEEARKFLPVGTQLNIDLGSSMVPGVVSKTENSPNGSKRRKSREREDVDLDSEEGRRNKHSTISVDEEELSEMFDKVLLHDCGNETTANGGRENLQYNGQLHGSITSKAREKKQEKRKDSVDLRNLLILCAQAVSSDDRRIAYELLKQIRQHSTIIGDGFQRMAHFFANALEARMVGTGTGSRIYYESLAQSKISAADMLKAYQAHLSSCPFKKLSLFFMIKMILKVAENAKSLHVIDFGICYGFLWPMLIQFLAQLPDGPPNLRITGIDHPLPGFRPAEKIVESGRRLEKYCERFNVPFQYQAIPSNNWETIRVEDLKLDSNDVLVVNCFYRFNNLLDETVEESSPRDAVLRLIRKMNPNIFVHSVVNGSYHAPFFITRFREALFHFSALYDALDVNLPRDSDERMMLEREFLGRQIMNVVACEGVQRVERPETYKQWQVRCMRAGFKQLPLDKEIMNKFRSKLTSYYHKDFVLDEDEGWMLQGWKGRIVYASCCWVPA 771
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 33752910 33755225 - CmPI595203_02g019990.1 Cmu02g1999 410048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g1999 771 MobiDBLite consensus disorder prediction 128 148 - -
Cmu02g1999 771 MobiDBLite consensus disorder prediction 305 333 - -
Cmu02g1999 771 MobiDBLite consensus disorder prediction 294 333 - -
Cmu02g1999 771 ProSiteProfiles GRAS family profile. 385 769 IPR005202 -
Cmu02g1999 771 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 378 768 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Cmu02g1999 771 Pfam GRAS domain family 394 768 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g1999 Cmu-Chr2:33752910 Cmu09g0932 Cmu-Chr9:9314219 6.00E-57 dispersed
Cmu10g2833 Cmu-Chr10:34841085 Cmu02g1999 Cmu-Chr2:33752910 4.80E-160 wgd
Cmu02g1999 Cmu-Chr2:33752910 Cmu03g0756 Cmu-Chr3:1730486 4.30E-148 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
5816 PF03514 GRAS 1.00E-104 CL0063 Cmu TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g1999 K27753 - csv:101203568 1174.07