Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g2011 ATGGGTAACGGGATTGGGAAGCTCGGCGTTTGCTTCACAGGAATCAACGACGGTAGGCGGCGGCCGGATATTTCCGTTCTGTTAACAAATCCACTAGATGAAGGTCTGGGGCACTCGTTTTGCTATGTCCGGCCGGATCCCTTAAGACTTTCGTCATCAAAAGTTCATTCCGAAGAAACCACCACTTTCCGATCAATCTCCGGCGCCTCTGTAAGTGCAAATACATCAACGCCTCTTTCTACTGCTCTTGTTGATCTGTATTCATACAATAGCATTGATCGAGCGGCGGCGTTTGAGAGTTCAACTTCTTTCGCTTCAATCCCTTTGCAACCGATCCCTAGAAACATGATAAATTCTGGTCCGATTTCGGGGAATTTCAATGGAATCCCCTGTTCTGGGCCTTTGGAAAGAGGGTTTTTATCGGGTCCAATCGAGCGAGGGTTTATGTCGGGTCCACTGGATCGGGGGATTTTTTCGGGTCCTCTTGAAAATTCTACATCCACTGAATTTCAGAGGAGTTTTTCTCATGGTGGTGGGTTTAATTCCAGATCTAGATCAAGAAAAAGCCGGTTAATTCGAATTCTGAGAACTGCAATTTCCAAGTCGATTCATCGAGGGCAAAATTCCATTGTGGCTCCGATTAAACCGGTTAAAGAACCCGATTGGATCGTCTTGCCCGAGAAGCATAACGAGAATTTGACTGTGAGTAGTTTGAATTTCAGTAGTGAAGGGAGTTTGGAGGATGATGATTCAATGGAAAGCCAAAATCTGCAGTGGGCTCAAGGAAAAGCAGGGGAAGATCGAGTTCATGTTGTGGTTTCTGAAGAACATGGATGGGTTTTCGTTGGGATTTATGATGGATTTAACGGTCCTGATGCTCCTGATTATCTCTTGTCCAATTTATATTCCTCTGTTCATAAAGAACTTAAAGGTTTGTTATGGGACGAAAAGCTCGATTCCGCGGGTGTTGCTGCTCCGGCAACTTCCCCTGTTCGTTCTGAGAATCCATGTTTAGAAACAAGAGATTTGGAGAGGAATCGAGTGAGTGATGCTTGTTCTCAATGTGTAGAACAAGAGAATCATCCTTGTGTTAGTGGAGAAGGGAAATCTGGATTGAATTCTAGGAAAAGAAAAGGTAAGAATTTAAGAGGAAAGTTTAGAGGAGCTGCTGAGAAGTGGGAGGATAATCAACGGCGGTGGAAGTGTGAATGGGACCGAGAAAGATTAGAACTTGATCGGAGGTTAAAGGAGCAGTTGAATCGATCGGGATTGAACGGTTCGAGGTCGATTAATCATTCAGATGTTCTCAAAGCCCTATCCCAAGCATTGAAGAAAACAGAGGAGGCCTATTTGGATATTGCAGACAAGATGCTTGATGAAAATCCTGAACTGGCTTTGATGGGTTCTTGTGTGCTTGTGATGCTTATGAAAGGAGATGATGTTTATGTGATGAATGTTGGTGACAGCCGAGCTGTTTTAGCGCAGAAGGCGGAGCCTGATTATTGGCTCGGGAAGATTCGACAAGACTTGGAGAGGATTAATGAAGAGCCAGTTCATGACATTGAAGCATTAGATTGTGATAGAGCATTCACTTCTACTAACCTTACTGCTTTTCAGCTTTCTATGGATCATAGTACTAGTGTTGATGAGGAAGTTCAGAGAATAAGAAATGAACACCCTGATGATGCTAATGCCGTGATGAACGACCGTGTTAAAGGCTCGTTGAAAGTTACTCGGGCGTTCGGTGCTGGTTTCCTTAAACAGCCTAAATGGAACAATGCATTGTTAGAGATGTTCAGAATCGACTATGTCGGGAGATCGCCATACATCAATTGTTTACCATCTCTCCACCACCATAGATTGGGACCAAAAGACAGGTTTTTGATACTATCATCTGATGGACTCTACCAATACTTCACAAATGAAGAAGCTGTTTCTGAAGTCGAACTTTTCATCGCATTGCAACCTGAAGGAGACCCGGCTCAACATCTGGTTGAATTACTTCTGTTTCGGGCTGCAAAGAGAGCTGGTATGGATTTCCATGAGTTACTCGAAATACCGCAGGGCGACCGGAGGAAGTATCATGACGACGTATCAATCATTGTAATTTCATTAGAAGGAAGGATATGGAGATCTTGTGTATAA 2145 43.78 MGNGIGKLGVCFTGINDGRRRPDISVLLTNPLDEGLGHSFCYVRPDPLRLSSSKVHSEETTTFRSISGASVSANTSTPLSTALVDLYSYNSIDRAAAFESSTSFASIPLQPIPRNMINSGPISGNFNGIPCSGPLERGFLSGPIERGFMSGPLDRGIFSGPLENSTSTEFQRSFSHGGGFNSRSRSRKSRLIRILRTAISKSIHRGQNSIVAPIKPVKEPDWIVLPEKHNENLTVSSLNFSSEGSLEDDDSMESQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLLSNLYSSVHKELKGLLWDEKLDSAGVAAPATSPVRSENPCLETRDLERNRVSDACSQCVEQENHPCVSGEGKSGLNSRKRKGKNLRGKFRGAAEKWEDNQRRWKCEWDRERLELDRRLKEQLNRSGLNGSRSINHSDVLKALSQALKKTEEAYLDIADKMLDENPELALMGSCVLVMLMKGDDVYVMNVGDSRAVLAQKAEPDYWLGKIRQDLERINEEPVHDIEALDCDRAFTSTNLTAFQLSMDHSTSVDEEVQRIRNEHPDDANAVMNDRVKGSLKVTRAFGAGFLKQPKWNNALLEMFRIDYVGRSPYINCLPSLHHHRLGPKDRFLILSSDGLYQYFTNEEAVSEVELFIALQPEGDPAQHLVELLLFRAAKRAGMDFHELLEIPQGDRRKYHDDVSIIVISLEGRIWRSCV 714
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 33857304 33860014 + CmPI595203_02g020110.1 Cmu02g2011 410060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g2011 714 Coils Coil 436 456 - -
Cmu02g2011 714 FunFam probable protein phosphatase 2C 4 224 710 - -
Cmu02g2011 714 PANTHER PROTEIN PHOSPHATASE 2C 240 705 IPR015655 GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro)
Cmu02g2011 714 Pfam Protein phosphatase 2C 432 498 IPR001932 -
Cmu02g2011 714 Pfam Protein phosphatase 2C 532 655 IPR001932 -
Cmu02g2011 714 ProSiteProfiles PPM-type phosphatase domain profile. 249 705 IPR001932 -
Cmu02g2011 714 Gene3D - 227 710 IPR036457 -
Cmu02g2011 714 SMART PP2C_4 250 703 IPR001932 -
Cmu02g2011 714 CDD PP2Cc 431 705 IPR001932 -
Cmu02g2011 714 SUPERFAMILY PP2C-like 263 706 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g2011 Cmu-Chr2:33857304 Cmu05g0668 Cmu-Chr5:5776213 1.20E-62 dispersed
Cmu10g1030 Cmu-Chr10:2277504 Cmu02g2011 Cmu-Chr2:33857304 7.60E-135 transposed
Cmu02g2011 Cmu-Chr2:33857304 Cmu04g0856 Cmu-Chr4:23096116 1.60E-197 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g2011 - - - 0.0