Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu02g2021 | ATGGCTCACTCTTCTCTTCCAATCTTCTTAGATCCTCCAAATTGGCATCAACCGAATCAGCCAGCAGCTGCAGCAACAAATGATGTTCATCAAGACCCACGTCAGCTTCCGGCAGCATTTCTACAACCGCCGCCGCCGCCAACGGCAGGTCATGGAGGAGGCGGAATCCGGCCGGGTTCTATGGCGTATAGAGCCCGGCTGGCGATGATTCCCCAGCCGGAGGCAGCACTAAAATGCCCTCGTTGTGATTCTACAAACACCAAATTTTGCTATTTCAACAATTACAGCCTTTCTCAGCCGCGCCACTTCTGTAAAGCTTGCCGCCGGTACTGGACCCGCGGCGGCGCTCTTAGAAACGTCCCCGTCGGTGGTGGCTTTCGCAAGAACAAGAAGAAGAAGAAATCTAACCCGTCTAAGTCCCCCACTGCCTCTCAATCTCAAATGGGTAATTCAAGATCAATAATGTCAAGAAGCTGCAACAACATGGAGAGCAGTAGTACAATGAGGGATTTCCCATCACATTCTTCTTTGCCTTCATTAAATATCCTTCCATCTCTTCAACAACATTTTTCTCGTAATTTTGGAAACAACTTCCCCGGAATTCACATCAATAATTCCGCAGTCGCCAGAGAATACGACGTCGAATGGCAACAACAACAACAACCATTCATCGTGGCCGGACTAGAATCTCCGACGACTGCGACAACAACTGCCGCAGCATACACACAAGCTGAAGTCAACAACAACGGCAACAACAACAACTTTGTTGCTAACTCATTACAACAAGCAGCTGGTTTAGTACAATACAATAATAACTGTCATCAACAACTGCAAAATCTGACACCCTTTTCCAGAATTCCTATGAAAAATGAAGAACAAAACCAAGAACAAGGAATATTATTATCAAATTTCTTACGACCAAATGATCACAACAGCCAGTTTTGGGGAAGTAATCATCAAAATTCATGGACGGATCATTTGTCAGCTCTCAGTTCTTCTTCAAGCAGCCATCTTTTGTAA | 1020 | 45.59 | MAHSSLPIFLDPPNWHQPNQPAAAATNDVHQDPRQLPAAFLQPPPPPTAGHGGGGIRPGSMAYRARLAMIPQPEAALKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGFRKNKKKKKSNPSKSPTASQSQMGNSRSIMSRSCNNMESSSTMRDFPSHSSLPSLNILPSLQQHFSRNFGNNFPGIHINNSAVAREYDVEWQQQQQPFIVAGLESPTTATTTAAAYTQAEVNNNGNNNNFVANSLQQAAGLVQYNNNCHQQLQNLTPFSRIPMKNEEQNQEQGILLSNFLRPNDHNSQFWGSNHQNSWTDHLSALSSSSSSHLL | 339 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 33927175 | 33928923 | - | CmPI595203_02g020210.1 | Cmu02g2021 | 410070 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu02g2021 | 339 | MobiDBLite | consensus disorder prediction | 36 | 59 | - | - | |
Cmu02g2021 | 339 | ProSitePatterns | Zinc finger Dof-type signature. | 79 | 115 | IPR003851 | GO:0003677(InterPro)|GO:0006355(InterPro) | |
Cmu02g2021 | 339 | MobiDBLite | consensus disorder prediction | 138 | 174 | - | - | |
Cmu02g2021 | 339 | MobiDBLite | consensus disorder prediction | 11 | 30 | - | - | |
Cmu02g2021 | 339 | Pfam | Dof domain, zinc finger | 76 | 131 | IPR003851 | GO:0003677(InterPro)|GO:0006355(InterPro) | |
Cmu02g2021 | 339 | MobiDBLite | consensus disorder prediction | 121 | 174 | - | - | |
Cmu02g2021 | 339 | ProSiteProfiles | Zinc finger Dof-type profile. | 77 | 131 | IPR003851 | GO:0003677(InterPro)|GO:0006355(InterPro) | |
Cmu02g2021 | 339 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.4-RELATED | 71 | 264 | IPR045174 | GO:0003700(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu02g2021 | Cmu-Chr2:33927175 | Cmu02g2076 | Cmu-Chr2:34451660 | 3.00E-29 | dispersed | |
Cmu10g2821 | Cmu-Chr10:34753018 | Cmu02g2021 | Cmu-Chr2:33927175 | 1.00E-37 | wgd | |
Cmu02g2021 | Cmu-Chr2:33927175 | Cmu03g0779 | Cmu-Chr3:1974577 | 5.20E-37 | wgd | |
Cmu02g2021 | Cmu-Chr2:33927175 | Cmu03g0864 | Cmu-Chr3:3146159 | 5.20E-29 | wgd | |
Cmu02g2021 | Cmu-Chr2:33927175 | Cmu04g0866 | Cmu-Chr4:23198980 | 2.60E-36 | wgd | |
Cmu02g2021 | Cmu-Chr2:33927175 | Cmu07g0371 | Cmu-Chr7:3678771 | 5.40E-42 | wgd | |
Cmu02g2021 | Cmu-Chr2:33927175 | Cmu09g1907 | Cmu-Chr9:35135199 | 1.90E-39 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
5817 | PF02701 | zf-Dof | 4.80E-33 | No_clan | Cmu | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu02g2021 | - | - | - | 0.0 |