Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g2065 ATGGGTTGCTTTAGCCATATCAAAAAGCAGAGGAAAAGATTATTAGGGAGCAATGTACAAAGCTTTCAACAAGCTTCTTCAGCAAAAGTAAAAGCGGATCTGAAAGTAAAAACAAGGGAAGAAGTAAAAGAGATGGTTTATGAAAATGAGCAGCTGGCGTCAAAAATAAACAAAGAGGTTTCGAGTGAAGCAAAAACAAAGGAAGAGATAGAAACATTTACATTTCAGGAACTTGCAGCCGCAACAAGAAATTTCAAGTCGGATTGCTTTCTGGGTGAAGGAGGATTTGGTAAGGTTTACAAGGGCCACTTGGGAAGAATCAACAAGCTTGTAGCTATAAAGCAACTTGATCGGAATGGGATTCAAGGGGCAAGAGAATTCGTGGTGGAAGTGGTGACATTAAGTTTGGGGAATCATCCAAATCTTGTAAAATTGATTGGGTATTGTGCTGAGGGTGATCAAAGACTCTTGGTTTACGAGTTCATGCCATTAGGCTCATTGGACAAACATTTGCACGATGTTCCACTAGGGAAAAAAGTGCTTGATTGGAATACAAGAATGAAGATAGCAGTGGGAGCAGCAAAAGGATTGGAATATTTACACAACAAAATGAGGCCAGCAGTTATATATAGAGACTTAAAATGCTCCAATATTTTGTTGGGTGAAGGTTATTGGCCAAAGCTTTCAGATTTTGGTCTAGCCAAAGTGGGTCCTAGTGGAGATAACACTCATGTCTCAACTAGAGTTATGGGAACTTATGGATATTGTGCACCAGATTATGCAATGACTGGCCAATTGACATTCAAATGTGATATCTATAGCTTTGGAGTTGTTCTATTGGAACTCATCACTGGAAGAAAAGCCATTGACTATACAAGACCTTCAAAGGAGCTGAGTTTGGTAGCATGGGCAAGACCATTGTTCCGAGACCGAAAGAGGTTCTTGGTAATGGCGGACCCAAGGCTGGACGGTCAATTTCCCATTAGAGGATTGTATCAAGCTCTTGCCATTGCAGCGATGTGTCTACAAGAACAACCTACAATGAGGCCACTTATATCTGAAATCGTCACTGCTTTAAATTTCCTTGCTTCTCAAAATTTTACTCAAAGAAGAAGGGATTAA 1122 40.11 MGCFSHIKKQRKRLLGSNVQSFQQASSAKVKADLKVKTREEVKEMVYENEQLASKINKEVSSEAKTKEEIETFTFQELAAATRNFKSDCFLGEGGFGKVYKGHLGRINKLVAIKQLDRNGIQGAREFVVEVVTLSLGNHPNLVKLIGYCAEGDQRLLVYEFMPLGSLDKHLHDVPLGKKVLDWNTRMKIAVGAAKGLEYLHNKMRPAVIYRDLKCSNILLGEGYWPKLSDFGLAKVGPSGDNTHVSTRVMGTYGYCAPDYAMTGQLTFKCDIYSFGVVLLELITGRKAIDYTRPSKELSLVAWARPLFRDRKRFLVMADPRLDGQFPIRGLYQALAIAAMCLQEQPTMRPLISEIVTALNFLASQNFTQRRRD 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 34297523 34302918 - CmPI595203_02g020650.1 Cmu02g2065 410114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g2065 373 PANTHER OS07G0668900 PROTEIN 42 369 - -
Cmu02g2065 373 CDD STKc_IRAK 91 360 - -
Cmu02g2065 373 PIRSF ILK 15 372 - -
Cmu02g2065 373 Gene3D Transferase(Phosphotransferase) domain 1 162 372 - -
Cmu02g2065 373 ProSitePatterns Protein kinases ATP-binding region signature. 91 114 IPR017441 GO:0005524(InterPro)
Cmu02g2065 373 FunFam probable serine/threonine-protein kinase RLCKVII 57 161 - -
Cmu02g2065 373 SUPERFAMILY Protein kinase-like (PK-like) 70 366 IPR011009 -
Cmu02g2065 373 SMART serkin_6 85 362 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu02g2065 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu02g2065 373 Gene3D Phosphorylase Kinase; domain 1 52 161 - -
Cmu02g2065 373 Pfam Protein kinase domain 90 356 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu02g2065 373 ProSiteProfiles Protein kinase domain profile. 85 362 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu02g2065 373 FunFam Serine/threonine-protein kinase PBS1 162 373 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g2065 Cmu-Chr2:34297523 Cmu05g0647 Cmu-Chr5:5533543 8.90E-131 dispersed
Cmu10g2786 Cmu-Chr10:34455541 Cmu02g2065 Cmu-Chr2:34297523 5.90E-133 wgd
Cmu02g2065 Cmu-Chr2:34297523 Cmu03g0832 Cmu-Chr3:2664692 6.50E-150 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75338 PF00069 Pkinase 7.10E-42 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g2065 - - - 0.0