Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g2184 ATGAACTGGAGTCCCAGCAGAATCTTGATGTTTCGTTTGGAAGTTCTTGGAAGATTGCTGGTGGGTTCAACTCAGCAAATGAGTATGGTTGAATACAGCTTCAGAGGATATCTGGCGCAGCTTTTGATATCCGCATTGTACCTTAGAAATGATTCCTTGGAAATGGAAGAATTTGATTCTGAGAAAGCTGGGACGAGTTATGCGCTAGATGTAGGAAAAAGGTTTTCTATAGAGGATGACATTAATCGTCTGTTTCAAGCAATTGATATCAGAACCTTACGTAAGAGGTCAAGTCAGCAACGTGAAGTTGATAAAGATGCTCTGCGGAAGAGTGCGATGAAAAGACCAGTTAGAGTAGGTTCATCTCACATGGCAGGGATTGGAATTTCTGAACCTGCAAGTTTAAAGCAGGCGTTGAGGGGCTTATGCATATCCCAGGCTGCAGAAATGGCTGCTTCAAAGAGGTTAACAAGGTCTGTAGGTTCACCCAGAATCTCTGAAGCAGGAATTATCAAAAGATTGTATAGGGCGGTGGTGGTTGAGGCCAGTGGATCTGGTGTGCCTGTAAATGAAAGCAAAGCAAATTTGGTAGAAATTTCCATCGTTTCAGAAAGAATTATGTCAACTTTTCAAAATAAGATGCCCGAATTGTCGCATAAAACTGAGGCTGATATACCAAACCAAGGAGCTGAGTCTTCTTCTTCCAAGGATACTGGGGTATCAGAAAAGGCGGGTGTGGATAGATTGATGTCAAAGGATCTTGTTTTTAATACGGCTACTGAGGTGACAAGTATAAAGCCACCTGGTGAGGTGGGAAAACTTAAATCTCCTTCCCTTACTCCTTCTGGTGAGAAGGATCCGGCTGTGAACGGTATGGCTATTTCCTCAACTGAAGATTTGACAAAAAATTCAGTGCCAGAGAAGGAGAGAGGTACAATGGATTGTTTATCTTCTCTATCAAGCTCTGCATCTGTTGTCAGGCCGAACAAATCAGCTTTCAATAATACACGCTTCATCAAACCTATTTTCAGGACCAAGAATTTTGTCAAGAAGAAAGCAAAACTTGAACCAAATTCCTCCCCTAGTATGTCCGATGTCTGCACAGTAACGTTTGACACTGATTTGGCTACCATAGCAGAAAAGTCTGAGAACCAGATGCCAGATAATGCACAGCTTCATGAGATTAAAGAAGAAGATAAATGTTCTTCTGTCTCTAGTAACATAACTTTAGGTGTTGAAGTAAGTGGAAATGTAGGAAACACAGAATCTAGTAGACCTGGTACGTCTCTCAGCTGCTGTAACAGGAACAGACCAACTATTATGCTATCTGATGAGAGATCCAGATCAAGAGAGAAAGGGATGTTCTCTCAGAGCTCTAAAAGTAGTGTTGGTGAATGTAGCAGTAGCCCAAGCATCAGTGGGGAAAGCATTCTCAGTGGATCAAGTCGCAGTGGAGTTCGGCCTCACATGTCAAAAGACTTGAAATGGGAGGCTATCCACCACCTCAAGGATCAACATAAATGCCTAGGTCTGAGAAACTTCAAGCTGCTAAAGAGACTTGGTCTCGGGGACATTGGGACTGTCTATCTCTCTGAGCTTTGCGATTCAAGCTGTCTTTTTGCTATGAAAGTGATGGACAAGGAGTTCTTGGCAAGTAGGAAAAAAATAATTCGGGCACAAACTGAGAGAGAGATACTACAAATGCTTGACCATCCATTTCTCCCTACATTATATGCCCATTTCGAGACGGATAAGCACTCATGCCTTGTCATGGACTACTGTCCTGGTGGAGATCTCCACGTACTGCGACAGAAGCAACCATGCAAGAGTTTCTCTGAGCGTGCAGTCAGGTTCTATGTCGCTGAAGTTCTTCTTGCACTGGAGTACTTGCACATGCTAGGAGTTGTTTATCGCGACCTGAAACCCGAAAACGTCCTGGTCCGAGAAGATGGGCACATCATGCTCACGGACTTTGATTTGTCCCTTAGATGTGCTGTTAACCCAACGCTGCTTCAATCATCATCTCCAGTTGTGGAACCCACTAAGAGGACGTTGAATCCCTGTGATGAATCTAGTTGCATTGACCCTTTCTGCCTCCATCCATCCTGGCAGGTCTCATGCTTCACTCCCAAAGTTCTATCTTCTCCATACAAATCCCGGAGAACGAAAACAGATCATCAGGCTAGTCTATTACCACAGCTTATAGTTGAACCAACAGGTGCACGGTCCAATTCGTTTGTAGGAACCCATGAATACCTCGCTCCTGAGATTGTCAAGGGTGACGGCCATGGGAGCGCTGTTGATTGGTGGACTTATGGGATTTTCCTGTTTGAGCTACTATATGGTAAGACTCCCTTCAAGGGTTCAGGAAATGAGGACACATTAGCGAACATAGTATCCCAAACTCTCAAGTTCCCCGATTGCCCCATAGTTAGTTTTCATGCAAGAGACCTGATCAGATGTCTGCTGACGAAGGAGCCCGAGAACCGATTAGGCTCGACAAAAGGAGCTATCGAGATTAAGCAGCATCCGTTTTTTGAAGGCCTCAATTGGGCTCTAATACGTTGTGCAACACCACCCGAGCTTCCCAAGTTTTTCGACGGTGGAACTAGTGCAATGCCAGTGGATTCTGGGGAGAATACAAAGCGTAGAGATCTCGAAAATATGGAAGCGGATGCAGCAATGTTTGACCTGTTTTAG 2700 44.26 MNWSPSRILMFRLEVLGRLLVGSTQQMSMVEYSFRGYLAQLLISALYLRNDSLEMEEFDSEKAGTSYALDVGKRFSIEDDINRLFQAIDIRTLRKRSSQQREVDKDALRKSAMKRPVRVGSSHMAGIGISEPASLKQALRGLCISQAAEMAASKRLTRSVGSPRISEAGIIKRLYRAVVVEASGSGVPVNESKANLVEISIVSERIMSTFQNKMPELSHKTEADIPNQGAESSSSKDTGVSEKAGVDRLMSKDLVFNTATEVTSIKPPGEVGKLKSPSLTPSGEKDPAVNGMAISSTEDLTKNSVPEKERGTMDCLSSLSSSASVVRPNKSAFNNTRFIKPIFRTKNFVKKKAKLEPNSSPSMSDVCTVTFDTDLATIAEKSENQMPDNAQLHEIKEEDKCSSVSSNITLGVEVSGNVGNTESSRPGTSLSCCNRNRPTIMLSDERSRSREKGMFSQSSKSSVGECSSSPSISGESILSGSSRSGVRPHMSKDLKWEAIHHLKDQHKCLGLRNFKLLKRLGLGDIGTVYLSELCDSSCLFAMKVMDKEFLASRKKIIRAQTEREILQMLDHPFLPTLYAHFETDKHSCLVMDYCPGGDLHVLRQKQPCKSFSERAVRFYVAEVLLALEYLHMLGVVYRDLKPENVLVREDGHIMLTDFDLSLRCAVNPTLLQSSSPVVEPTKRTLNPCDESSCIDPFCLHPSWQVSCFTPKVLSSPYKSRRTKTDHQASLLPQLIVEPTGARSNSFVGTHEYLAPEIVKGDGHGSAVDWWTYGIFLFELLYGKTPFKGSGNEDTLANIVSQTLKFPDCPIVSFHARDLIRCLLTKEPENRLGSTKGAIEIKQHPFFEGLNWALIRCATPPELPKFFDGGTSAMPVDSGENTKRRDLENMEADAAMFDLF 899
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 35479174 35482439 - CmPI595203_02g021840.1 Cmu02g2184 410233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g2184 899 FunFam serine/threonine-protein kinase D6PK-like 598 665 - -
Cmu02g2184 899 MobiDBLite consensus disorder prediction 267 290 - -
Cmu02g2184 899 MobiDBLite consensus disorder prediction 454 486 - -
Cmu02g2184 899 ProSitePatterns Serine/Threonine protein kinases active-site signature. 635 647 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu02g2184 899 PANTHER FLIPPASE KINASE 1-RELATED 407 870 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cmu02g2184 899 Gene3D Transferase(Phosphotransferase) domain 1 741 863 - -
Cmu02g2184 899 MobiDBLite consensus disorder prediction 445 487 - -
Cmu02g2184 899 Gene3D Transferase(Phosphotransferase) domain 1 594 662 - -
Cmu02g2184 899 SMART serkin_6 514 846 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu02g2184 899 FunFam Serine/threonine-protein kinase D6PK-like 512 597 - -
Cmu02g2184 899 FunFam serine/threonine-protein kinase D6PK-like 741 864 - -
Cmu02g2184 899 Pfam Protein kinase domain 515 664 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu02g2184 899 Pfam Protein kinase domain 743 846 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu02g2184 899 ProSiteProfiles Protein kinase domain profile. 514 846 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu02g2184 899 CDD STKc_phototropin_like 514 864 - -
Cmu02g2184 899 MobiDBLite consensus disorder prediction 225 240 - -
Cmu02g2184 899 MobiDBLite consensus disorder prediction 220 244 - -
Cmu02g2184 899 SUPERFAMILY Protein kinase-like (PK-like) 489 865 IPR011009 -
Cmu02g2184 899 Gene3D Phosphorylase Kinase; domain 1 512 593 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g1087 Cmu-Chr1:17486197 Cmu02g2184 Cmu-Chr2:35479174 6.70E-152 dispersed
Cmu02g2063 Cmu-Chr2:34274415 Cmu02g2184 Cmu-Chr2:35479174 5.30E-98 dispersed
Cmu02g2184 Cmu-Chr2:35479174 Cmu05g0012 Cmu-Chr5:161930 1.30E-148 dispersed
Cmu02g2184 Cmu-Chr2:35479174 Cmu02g2185 Cmu-Chr2:35495495 1.30E-114 tandem
Cmu02g2316 Cmu-Chr2:36715557 Cmu02g2184 Cmu-Chr2:35479174 3.60E-64 transposed
Cmu03g1239 Cmu-Chr3:7185350 Cmu02g2184 Cmu-Chr2:35479174 5.70E-103 transposed
Cmu07g1051 Cmu-Chr7:25374442 Cmu02g2184 Cmu-Chr2:35479174 6.70E-91 transposed
Cmu02g2184 Cmu-Chr2:35479174 Cmu04g1024 Cmu-Chr4:24838821 4.20E-195 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75343 PF00069 Pkinase 1.30E-36 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g2184 - - - 0.0