Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu02g2185 | ATGTCTACTGAACCCGGTCCAACATGGCACCCAAATTTTAGGCAAATCGAGCCCTTCCAAAATGGGCCCCCACTGGGCCCAATTAGCCCCCATGACCCGGCCCAATATTTCCTCCTTCAAAAATCACTCCCTTGCCCCTGCCTCGGCTCCTCAAACGCCTTCCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCCTCTCTCCAATGGAGTCATCTCCCGACGACATCGCCGACGACCTACAAAGCCTCAGCTTCAACTCTACCAACACCAACCGCAGCACAAGCTCCGGCTCCGAGACCACTCTCACCGCCTCCTCCTCCTCCTTTAACATCCCTTCCATTCTCAGCAAGCCCCACGCGCCTTCCTCCGACCCTTGCTGGTCCGCTGTTAACCGGATCCGATCCGAATCTTCGTCTCGTCAACTCGTCTTCTCCGACCTTAAGTTCTTCCACCGTCTTGGCTCTGGCGACATTGGCTCCGTCTACCTCTCCGGCCTCAAGTCCGCTGGAACCGACGGATGTTTGTTTGCAGCGAAGGTAATGGATAAGAAGGAACTAGCGAGTAGGAGTAAAGAAGGCAGAGCAAGGACTGAGAGAGAGATTTTGGAGTCTTTGGACCATCCGTTTCTACCGACGCTCTATGCTAGTATCGACTCGCCGAAGTGGCTCTGTCTCTTGACGGAGTTCTGTCCCGGCGGCGACCTACACGTTCTCCGGCAACGGCAACCTAACAAACGCTTCGATGAACTCGCCGTGAGATTCTATGCATCGGAGATAGTGGTTGCTATCGAGTACCTTCACATGATGGGGATTGTTTACCGTGATCTGAAGCCGGAAAATGTACTGGTACGATCGGACGGCCATATCATGCTCACTGATTTTGATCTCTCCTTGAAGTGTGAGGATTCGACGGCGACCCCACAGGTTATCAATGCTAAATATCTGACAAACGGCACCGCCCCGCTAAAGGACTACCAAATTGATGCCCCTCCTTTCACATCATCCTCCTGCATTCTTCCAAACTGTATAGTCCCGGCCGTGTCATGTTTCAACCCAAAACGCAAGCGCAAGAAGAAGTCTGGTCACCGTAACGGACCCGAGTTTGTCGCTGAACCGGTTGACGTCCGGTCAATGTCATTTGTTGGCACCCACGAGTACTTGGCCCCGGAGATCGTCTCTGGTGAGGGCCATGGAAGCGCGGTGGACTGGTGGACTCTAGGGGTGTTTGTGTTTGAGTTGTTTTATGGAGTGACACCTTTTAGAGGCATGGACAATGAGCTCACCTTGGCCAACATAGTGGCTAGAGCTCTTGAGTTCCCTAAAGAACCAGCGGTGCCAACGGCAGCGAAGGACCTCATCTCTCAGTTATTGATCAAAGACCCGGCGAGACGGTTGGGATCGACGACAGGGTCGTCGGCAATCAAGCACCATTCATTTTTTCAAGGAGTAAATTGGGCATTATTGAGATGTACGTCGCCACCATTTATTCCACCACCTTTTAGTAGAGAAAAAATTGCATCGGATGAAAGCTGCACAGAGGCTCCAAAGCCGCCTCTTTCCTGTACTTCCCATGGTACACTGTCATCCGTTCCCTGCCTTGGTGTCATCAGAGATGTCATGGATGAATTAGCCTCTCATTTTCATGTCTAG | 1653 | 51.91 | MSTEPGPTWHPNFRQIEPFQNGPPLGPISPHDPAQYFLLQKSLPCPCLGSSNAFPSSSSSSSSSSSLSPMESSPDDIADDLQSLSFNSTNTNRSTSSGSETTLTASSSSFNIPSILSKPHAPSSDPCWSAVNRIRSESSSRQLVFSDLKFFHRLGSGDIGSVYLSGLKSAGTDGCLFAAKVMDKKELASRSKEGRARTEREILESLDHPFLPTLYASIDSPKWLCLLTEFCPGGDLHVLRQRQPNKRFDELAVRFYASEIVVAIEYLHMMGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCEDSTATPQVINAKYLTNGTAPLKDYQIDAPPFTSSSCILPNCIVPAVSCFNPKRKRKKKSGHRNGPEFVAEPVDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGVFVFELFYGVTPFRGMDNELTLANIVARALEFPKEPAVPTAAKDLISQLLIKDPARRLGSTTGSSAIKHHSFFQGVNWALLRCTSPPFIPPPFSREKIASDESCTEAPKPPLSCTSHGTLSSVPCLGVIRDVMDELASHFHV | 550 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 35495495 | 35500962 | + | CmPI595203_02g021850.1 | Cmu02g2185 | 410234 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu02g2185 | 550 | Gene3D | Transferase(Phosphotransferase) domain 1 | 235 | 306 | - | - | |
Cmu02g2185 | 550 | Gene3D | Transferase(Phosphotransferase) domain 1 | 377 | 499 | - | - | |
Cmu02g2185 | 550 | Pfam | Protein kinase domain | 151 | 316 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu02g2185 | 550 | Pfam | Protein kinase domain | 378 | 481 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu02g2185 | 550 | PANTHER | FLIPPASE KINASE 1-RELATED | 72 | 502 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
Cmu02g2185 | 550 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 272 | 284 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cmu02g2185 | 550 | FunFam | serine/threonine-protein kinase D6PK-like | 235 | 302 | - | - | |
Cmu02g2185 | 550 | FunFam | serine/threonine-protein kinase D6PKL2 | 147 | 234 | - | - | |
Cmu02g2185 | 550 | MobiDBLite | consensus disorder prediction | 57 | 103 | - | - | |
Cmu02g2185 | 550 | SMART | serkin_6 | 148 | 481 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu02g2185 | 550 | ProSiteProfiles | Protein kinase domain profile. | 148 | 481 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu02g2185 | 550 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
Cmu02g2185 | 550 | Gene3D | Phosphorylase Kinase; domain 1 | 146 | 234 | - | - | |
Cmu02g2185 | 550 | FunFam | serine/threonine-protein kinase D6PK-like | 376 | 499 | - | - | |
Cmu02g2185 | 550 | SUPERFAMILY | Protein kinase-like (PK-like) | 126 | 512 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu02g2185 | Cmu-Chr2:35495495 | Cmu05g0012 | Cmu-Chr5:161930 | 2.90E-114 | dispersed | |
Cmu02g2184 | Cmu-Chr2:35479174 | Cmu02g2185 | Cmu-Chr2:35495495 | 1.30E-114 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
75344 | PF00069 | Pkinase | 1.20E-34 | CL0016 | Cmu | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu02g2185 | K08286 | - | csv:101207262 | 866.685 |