Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g2241 ATGATGGAAGGTATGGTTCTCAAGCTTCCATCCTTCCATTCCCAATTCCAATTCATAAACCCTAGTCGTTGCATTTCCTCTTTCTCCTCCACTCTTCCTACTTCCTCTTCTCCTTTTCTCCGATTCCGCAACCGCCGATTTTCTTCTCCCTTCTCAGTATCTGCTTCTGCTTCCACCTCCAGGGAAACCGACAGCTTGCATCTTAACTTTCTTTCGCTTGGCCACACAACCCGTCCTGATTTCCCCATCCTCCATCAGGAAGTAAATGGCTCCAAGCTTGTCTACTTGGACAACGCTGCCACCTCTCAGAAACCTATTGCTGTGTTGAAAGCTTTGCAGAATTATTATGAGTCTTACAATTCAAATGTTCATCGTGGCATACACTCCTTGAGTGCGAAAGCAACTGACGAGTATGAGCGGGCAAGAAAGAAAGTTGCGTCTTTTATCAATGCTGGAGAAGCTAAAGAGATTGTTTTTACCAGGAATGCAACTGAAGCTATCAATTTAGTGGCTTATTCTTGGGGCCTAGCAAATTTAAAATCAGGAGATGAGATCATACTTACGGTTGCTGAACATCATAGTGCCATTGTACCTTGGCAACTTGTAGCTGAAAGGACTGGTGCTATTCTGAAGTTTGTGAGTTTAGGTGAACATGATGTTCCAAACTTAAAAGACTTAAAGGAGATGTTTTCAACAAAAACGAAGCTTGTGGTTACCCATCATGTATCAAATGTACTAGCATCTGTTCTTCCAATAGAAGAAATAGTTGGCTTGGCACATCGTTTTGGGGCAAAGGTGCTAGTAGATGCATGCCAGAGTGTTCCACATATGGTTGTTGACGTCCAGGTGCTTGATGCTGACTTTCTTGTTGCTTCTTCTCACAAGATGTGTGGGCCTACAGGCATCGGATTTTTGTATGGAAAGATTGATCTGCTGTCTGCAATGCCTCCATTCTTAGGTGGTGGAGAGATGATCTCAGATGTATTTCTTGACCATTCCACATTTGCACAACCTCCTTCCAGATTTGAGGCTGGGACACCAGCAATTGGAGAAGCAATTGGATTGGGAGCTGCTATTGATTATTTGTCCGGAATTGGAATGCAAAAGATTCATAGTTATGAAGAAGAATTGGCGAATTATCTATATGAAAACCTTCGTGCAGTCCCTAACATTCGGATATATGGCCCAGCTCCCACTGCACATGTTCAACGTGCTGCTCTGTGTTCTTTCAACATTGGAGACACTCATCCAACCGACATAGCAACCTTTCTCGATCAACAGCATGGTGTAGCCATTAGATCGGGACATCACTGTGCGCAGCCCCTCCATCGGGCTCTTGGTGTCAGCTCAAGCGCACGAGTTAGCCTTTACTTCTACAACACAAAAGAGGATGTGGACTACTTTATCCAGGCTCTAAACGACACGCTCGAACTGAAACTTCTAGACTGCAAGGACTATGCTCTATTTCTTGCTTTGAAGAAGATTGTCATTCTTATTATTATCTTGAGCATCCTCCTGTGTCATTTACTACAAGATCATTGCCCATCCTCAGGGAAGCTTCTACTTGAATCATCCATGGATTTTGATCGAACTCAAATCGAAAACGAAAGGAGAAACTTACATGGAGAAAGATTTGGCCAAAACGCAGCTCCTCAATCAAGAATCGCAAGAGTAATATCTCGATCATTGTTCTTCGCTGTGATTCTCCTCTTAATTCCTCACATTGGTCCCATATTCAACGACCAAGGAAAATTCCTCTCCTTCGATTCCACAAACCCTAACTCCATAACAAAACAAGAATTCTATGACTTAATCGACGAATTGAAAACCGCCGAAATTCTCACAAAGGAGAAAAAGAGCCTTGTGTTGATTCCAGGATCGAATTCAATCAACGAAGCCCCGAATGACTATGCAGATTACCTGAGAAGTATGGGAGCCGATGTAGTAATAGAGAACAATTTTTTGTTTGGAGGCTCCTTTAAGAACGAATCGTTTGATATTGTGTTCACGCTAGGGCAACTCGGAGCCGGATTTGTTGACCGTGTTCTTAAAAGCGGCGGCGCAGTGGTTGTTCCGGCGAAGGATATGTCTCTAAATGTGTATCTTGATGAGTTGAATTATACGTGCGTTTATTTAAAGCCATACAGTCTTGAATCGATCATCATGGTGGTGGTGAAACCAACGCCGTCTGATCAATCAGATGCCGGAGTTTTCGGCAGTAAGGAAGAACTAATGGCGGCTCGGGCTGTTGTTCCTCAGCGACAACTTAGAATCAGAGATGAAGGTAAGCCGAAGGTCGTAGCGGTGGAAGGAAGAACAAGACGAATTCTTAAGGATATAGGAAATCTAGTGCCTGATCGAGCCATAGAAGGGAAACCCGGAACTCAACCAGCAGAGAAGAATAAGAAGGCAATCACCCAAAAGGTGGATGGAGGAGTTGGGAAGGAGGGAGTCAATGCAACGAAGGCTGGAGTAACTGAGAAACCGAAACTGAAGACTGTAATCCGCTCCAGCGACGAGAGATATATAAGCAACGTCAAAGATACTAAATCAAAGGACAAGAATAAGAGATCTCTGAGTTCAACCCTTAGTGCCAGAAGCAAGGCTGCTTGTGGACTCACCAACAAACCACTGGATTCTTCAGTAGCTAATATTGATGAAGCAGATGCCAACAATGAATTAGCCGTAGTAGAATACATTGATGACATGTATAAGTTTTACAAGCTTGCAGAAGATGAGAGTAGAGTATCAGATTACATGGGAGCACAGCCAGATTTGAATGCTAAGATGAGATCCATTCTCATAGATTGGTTGATAGAAGTTCATCGAAAGTTTGAACTGATGCCGGAAACCCTTTACCTCACTGTAAACATCGTCGACCGATTCCTTTCCTTAAAGACTGTACCCAGAAAGGAACTTCAATTGCTTGGTATCAGCTCTATGCTGATAGCATGCAAATATGAAGAGATTTGGGCCCCAGAGGTCAATGACTTTGTAAGTATATCTGCAAATACTTATCAAAGAGAACAAATTTTGGTGATGGAGAAAGTAATCTTGGGTAGGTTGGAATGGCTTTTAACAGTTCCTACCCCTTATGTTTTTCTTGTTCGGTATGTCAAGGCTTCTGAGCCATCTGATGATGAGATGGAGAATATGGTATTTTTTCTAGCTGAGCTTGGTCTGATGAACTATCCAATAGCAATATCATACAGCCCTTCAATGATTGCTTCAGCGGCTGTTTATGCTGCAAGATGCACACTTGAAAAGAGCCCAATCTGGACAGCAACTTTGCATCACCATACAGGCTATGTTGAAGAAGAGTTGAAGGAATGTGCAAAACTCCTTCTGAACTTACACCGTGGAGCTGTAGATTCAAAACTCAAGGCTGTATACAGAAAATATTCAAGTCCCGATCGCCGTGCCGTTTCTCTTCTTCCTCCAGCTAAAAGCTTAACTCCAGATTGTAGTCCAGAAGTATGA 3480 43.02 MMEGMVLKLPSFHSQFQFINPSRCISSFSSTLPTSSSPFLRFRNRRFSSPFSVSASASTSRETDSLHLNFLSLGHTTRPDFPILHQEVNGSKLVYLDNAATSQKPIAVLKALQNYYESYNSNVHRGIHSLSAKATDEYERARKKVASFINAGEAKEIVFTRNATEAINLVAYSWGLANLKSGDEIILTVAEHHSAIVPWQLVAERTGAILKFVSLGEHDVPNLKDLKEMFSTKTKLVVTHHVSNVLASVLPIEEIVGLAHRFGAKVLVDACQSVPHMVVDVQVLDADFLVASSHKMCGPTGIGFLYGKIDLLSAMPPFLGGGEMISDVFLDHSTFAQPPSRFEAGTPAIGEAIGLGAAIDYLSGIGMQKIHSYEEELANYLYENLRAVPNIRIYGPAPTAHVQRAALCSFNIGDTHPTDIATFLDQQHGVAIRSGHHCAQPLHRALGVSSSARVSLYFYNTKEDVDYFIQALNDTLELKLLDCKDYALFLALKKIVILIIILSILLCHLLQDHCPSSGKLLLESSMDFDRTQIENERRNLHGERFGQNAAPQSRIARVISRSLFFAVILLLIPHIGPIFNDQGKFLSFDSTNPNSITKQEFYDLIDELKTAEILTKEKKSLVLIPGSNSINEAPNDYADYLRSMGADVVIENNFLFGGSFKNESFDIVFTLGQLGAGFVDRVLKSGGAVVVPAKDMSLNVYLDELNYTCVYLKPYSLESIIMVVVKPTPSDQSDAGVFGSKEELMAARAVVPQRQLRIRDEGKPKVVAVEGRTRRILKDIGNLVPDRAIEGKPGTQPAEKNKKAITQKVDGGVGKEGVNATKAGVTEKPKLKTVIRSSDERYISNVKDTKSKDKNKRSLSSTLSARSKAACGLTNKPLDSSVANIDEADANNELAVVEYIDDMYKFYKLAEDESRVSDYMGAQPDLNAKMRSILIDWLIEVHRKFELMPETLYLTVNIVDRFLSLKTVPRKELQLLGISSMLIACKYEEIWAPEVNDFVSISANTYQREQILVMEKVILGRLEWLLTVPTPYVFLVRYVKASEPSDDEMENMVFFLAELGLMNYPIAISYSPSMIASAAVYAARCTLEKSPIWTATLHHHTGYVEEELKECAKLLLNLHRGAVDSKLKAVYRKYSSPDRRAVSLLPPAKSLTPDCSPEV 1159
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 36047677 36057962 + CmPI595203_02g022410.1 Cmu02g2241 410290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g2241 1159 CDD SufS_like 94 472 IPR010970 GO:0006534(InterPro)|GO:0030170(InterPro)|GO:0031071(InterPro)
Cmu02g2241 1159 Gene3D - 105 365 IPR015421 -
Cmu02g2241 1159 SUPERFAMILY Cyclin-like 1030 1151 IPR036915 -
Cmu02g2241 1159 Gene3D Aspartate Aminotransferase, domain 1 78 472 IPR015422 -
Cmu02g2241 1159 SMART Cyclin_C_2 1029 1148 IPR004367 -
Cmu02g2241 1159 SUPERFAMILY Cyclin-like 891 1024 IPR036915 -
Cmu02g2241 1159 Gene3D - 902 1144 - -
Cmu02g2241 1159 FunFam G2/mitotic-specific cyclin-1 1024 1143 - -
Cmu02g2241 1159 Gene3D - 916 1027 - -
Cmu02g2241 1159 SMART cyclin_7 936 1020 IPR013763 -
Cmu02g2241 1159 SMART cyclin_7 1033 1117 IPR013763 -
Cmu02g2241 1159 CDD CYCLIN_AtCycB-like_rpt2 1029 1147 - -
Cmu02g2241 1159 Pfam Aminotransferase class-V 94 468 IPR000192 -
Cmu02g2241 1159 ProSitePatterns Cyclins signature. 931 962 IPR048258 -
Cmu02g2241 1159 Pfam Cyclin, N-terminal domain 902 1026 IPR006671 -
Cmu02g2241 1159 NCBIfam SufS family cysteine desulfurase 77 476 IPR010970 GO:0006534(InterPro)|GO:0030170(InterPro)|GO:0031071(InterPro)
Cmu02g2241 1159 Pfam Cyclin, C-terminal domain 1029 1147 IPR004367 -
Cmu02g2241 1159 SUPERFAMILY PLP-dependent transferases 77 476 IPR015424 -
Cmu02g2241 1159 FunFam G2/mitotic-specific cyclin 915 1023 - -
Cmu02g2241 1159 CDD CYCLIN_AtCycB-like_rpt1 880 1024 - -
Cmu02g2241 1159 PANTHER CYSTEINE DESULFURASE 58 477 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g2241 Cmu-Chr2:36047677 Cmu04g0623 Cmu-Chr4:19952342 8.30E-111 dispersed
Cmu02g2241 Cmu-Chr2:36047677 Cmu05g1751 Cmu-Chr5:27610905 1.60E-45 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g2241 K11717 - csv:101222630 851.662