Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g2248 ATGGAACAAACAAAGTACAGAGCCGATCTTCTTTCATCCCTCTTCCTTGTCCTCATCCTTTTCCTCTCCCTTTCCGGCCGATCCGCCGTTCATGCCTACAAGAACTACACCGTCGGAGATTCCCTCGGTTGGTTCGACAAATTGGAGAAACCTGCCGTCGATTACCAAGAATGGACCGCTGGCAAGACCTTCGGCCTCGGCGATTTTCTAATTTTTAACACGGACAACAATCACTCGGTTGTGCAAACATACAATTTCACCACATACAAGCTTTGTGACTATGACGACGCATCGGAAAACGACACGATGGAATGGTCTGCTGCCGACCCGTCGGCGACCACTCCCTACGCCGTGACCGTGGCTGTCCCATTGGTGAAAGAAGGGACCAACTATTTCTTCTCTGGCAACTACGACGGAGAGCAATGCCAAAATGGCCAACAATTCAAAATAAACGTCACCCATGGACAAGGCCTCCCAAAAAGCATGAGAGATTCTTCCGACGAAGCTCCGGCTCCAGTAGTTCCCGACACCGGTGACCAAACCGAAGCTGCACCCGACACCATTGTCCCTTCCAGCTTCGACAATCCTCGAAACGACGTCGCTGATAGCGACAAGGAAGCTTCAGGCTCCGACTCGTTATCGCTTTGCATCAAGTTTAATGAGCTATTCTTCTTGTTAGCTGGTATTGTTTCTGCCTGCTTTTTTCTTTGTACTGAGTGA 720 49.86 MEQTKYRADLLSSLFLVLILFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQEWTAGKTFGLGDFLIFNTDNNHSVVQTYNFTTYKLCDYDDASENDTMEWSAADPSATTPYAVTVAVPLVKEGTNYFFSGNYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQTEAAPDTIVPSSFDNPRNDVADSDKEASGSDSLSLCIKFNELFFLLAGIVSACFFLCTE 239
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 36092953 36097077 + CmPI595203_02g022480.1 Cmu02g2248 410297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g2248 239 ProSiteProfiles Phytocyanin domain profile. 34 154 IPR003245 GO:0009055(InterPro)
Cmu02g2248 239 FunFam Early nodulin-like protein 18 33 155 - -
Cmu02g2248 239 Pfam Plastocyanin-like domain 46 146 IPR003245 GO:0009055(InterPro)
Cmu02g2248 239 SUPERFAMILY Cupredoxins 34 152 IPR008972 -
Cmu02g2248 239 Gene3D - 33 157 IPR008972 -
Cmu02g2248 239 PANTHER BLUE COPPER PROTEIN 18 166 IPR039391 GO:0009055(InterPro)|GO:0046658(PANTHER)
Cmu02g2248 239 MobiDBLite consensus disorder prediction 156 210 - -
Cmu02g2248 239 CDD Phytocyanin 34 152 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g2248 Cmu-Chr2:36092953 Cmu06g0029 Cmu-Chr6:315383 4.20E-33 dispersed
Cmu02g2248 Cmu-Chr2:36092953 Cmu08g1069 Cmu-Chr8:22976418 3.40E-11 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g2248 - - - 0.0