Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g2308 ATGGAGCGTTTGGAGGTGAATTTAGAGGAAACAAGAGAATATTACAAGACTGGAACAACAAAAGAAGCATCTTGGAGAGTTTCACAGCTTCAAGCCTTACGCCAATTTCTGGACCAAAATCGTCAACAAATTTACAATGCCCTTTCTCAAGACTTGGGAAAACACCATGTTGAAGCTTTTAGAGATGAGATTGGTAATCTGGAAATGTCCCTCAATTTCGCATTGGAAAATTTGAAACATTGGATGTCTCCCAAAAAGGCAAAATTGCCAGCAATAGCATTACTGAGTTCAGCAGAAGTGGTTGCCCAGCCTCTGGGCGTTGTTCTTATAATCTCATCTTGGAACTTTCCGTTTGGGTTGTCGTTGGAGCCTTTAATAGGAGCATTAGCAGCCGGAAATTGCGTGTTTCTGAAGACGTCGGAGTATTCTCCGGCAAGTTCAGCTTTTCTGGCCAAAGCCATCGGAAATTATGTTGACAACAAAGCCGTTAGAGTCGTTGAAGGAGGGCCGGCGACCGGCGAGCGCCTGCTGCAGCAGCGCTGGGAGAAGATTTTCTTTACAGGAAGTGAACGAGTGGGGCGGATCGTTATGGCGGCCGCCGTGAAACACTTAACGCCGGTGACATTGGAGCTCGGTGGGAAGTGCCCCGCCATTGTTGACTCCCTATCATTTTCATGGGATATTGAGTCTACTGCCAAACGGATCGTGATCGGAAAATTTGGAACCTGCGCCGGACAAGCTTGCATAGCAATCGATTATGTTCTTGTTGAACACAAATTTATATCCACCTTGGTCGAATTGCTGAAGAAGTTCATCAAGGAATTCTTCGATAAAAGTCCGAACCAAGCAAAAAGCATCGCGAGGATCGTAAACAAACAAAATTTCTTGAGGTTAAAGAATCTGGTGGATGAACCTGCTGTCCAAGCTGCAATCATCTATGGAGGATCAATGGACGAGGACAAATTGTTTGTGGAGCCGACTATTCTGTTGAATCCACCAAATGATGCAGGAATTATGAGAGATGAAATCTTTGGGCCAATCCTTCCCATAATTGGACTGGACAAGATTGAAGACAGTATAGATTTCGTCAATTCAAGGCCTAAGCCTCTTGCCATTTATGCCTTCACAAAAGACAAAGCTTTCCAAAGGAGACTCGTCTCAGAAACTTCATCCGGCAGCTTGACATTTAATGATGCAATTATTCAGTATGCAGTGGATACACTCCCGTTTGGAGGGGTTGGTGAAAGTGGGATTGGCCGGTACCACGGAAAATTCTCATTCGACACATTTAGTCATGAAAAGGCAATTTTGAAAAGGAGCTTCTTGGTGGACTTCTGGTTCAGATATCCGCCCTGGAACAATCACAAGCTTCAGCTGCTTAAACACGCTTACAATCTTAACTATTTTCAGTTTGTTCTTATTGTTTTGGGTCTTAAAAAGTCTTAA 1446 43.91 MERLEVNLEETREYYKTGTTKEASWRVSQLQALRQFLDQNRQQIYNALSQDLGKHHVEAFRDEIGNLEMSLNFALENLKHWMSPKKAKLPAIALLSSAEVVAQPLGVVLIISSWNFPFGLSLEPLIGALAAGNCVFLKTSEYSPASSAFLAKAIGNYVDNKAVRVVEGGPATGERLLQQRWEKIFFTGSERVGRIVMAAAVKHLTPVTLELGGKCPAIVDSLSFSWDIESTAKRIVIGKFGTCAGQACIAIDYVLVEHKFISTLVELLKKFIKEFFDKSPNQAKSIARIVNKQNFLRLKNLVDEPAVQAAIIYGGSMDEDKLFVEPTILLNPPNDAGIMRDEIFGPILPIIGLDKIEDSIDFVNSRPKPLAIYAFTKDKAFQRRLVSETSSGSLTFNDAIIQYAVDTLPFGGVGESGIGRYHGKFSFDTFSHEKAILKRSFLVDFWFRYPPWNNHKLQLLKHAYNLNYFQFVLIVLGLKKS 481
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 36617519 36623448 + CmPI595203_02g023080.1 Cmu02g2308 410357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g2308 481 SUPERFAMILY ALDH-like 9 454 IPR016161 GO:0016491(InterPro)
Cmu02g2308 481 Pfam Aldehyde dehydrogenase family 10 435 IPR015590 GO:0016491(InterPro)
Cmu02g2308 481 PIRSF ALDH 1 474 IPR012394 GO:0006081(InterPro)
Cmu02g2308 481 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 213 416 IPR016163 GO:0016620(InterPro)
Cmu02g2308 481 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 12 434 IPR016162 GO:0016491(InterPro)
Cmu02g2308 481 PANTHER ALDEHYDE DEHYDROGENASE 3 478 IPR012394 GO:0004029(PANTHER)|GO:0005737(PANTHER)|GO:0006081(PANTHER)|GO:0006081(InterPro)
Cmu02g2308 481 FunFam Aldehyde dehydrogenase 12 219 - -
Cmu02g2308 481 FunFam Aldehyde dehydrogenase 213 416 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g2308 Cmu-Chr2:36617519 Cmu07g0895 Cmu-Chr7:22732549 1.10E-162 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g2308 K00128 - csv:101205263 862.833