Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g2350 ATGAGCTGTTGCTGTCTAATGGCTGTTAGTCACTCAAGTCTTCCTCTTATCCTGTGCATGGACTTAAAGTTTGGTCTGTGCCTATTCTTTGTAGTCATGGATGAGCCTTCCATCAGTTCCACACGCTCGCAATTAACTGTGGATTTCTATAAGAGTTCATGTCCGAATGTTCTCAGAACCGTAAGGAGAGAAGTCATGAATGCTATTAAGAATGAGATGCGAATGGCTGCTTCGCTTCTTCGCCTCCACTTTCACGACTGCTTTGTTAATGGTTGTGACGGATCCGTGCTGTTGGATGGAAGTGATGGGGAGAAATTTGCACTTCCCAACATCAATTCTCTTAGAGGGCTTGAAGTTGTGGATAGAATCAAAGCCGCACTGGAGAGTTCATGCCCCGGAGTTGTATCATGTGCTGATTTATTAACTATAGCTGCAAGAGATTCTGTCCTCTTGAGTGGAGGACCGTCATGGAAGGTTTTATTGGGGAGAAGAGATGGATTGGTAGCGAATAAAACAGGAGCTGATCAAGGACTTCCCTCTCCATTTGAAAGCGTTAATGGTATAATCAACAAGTTTGTTGATGTTGGCCTTGATATCACCGACCTCGTCGCTTTATCTGGAGCCCATACAATTGGATTTGCAAGATGTGCAATGTTCAACAATAGGCTGTTCAACTTCTCAGGAAGTGGTTCTCCAGACCCAACCATGGAGTCCGCCATGGTATCTGATCTCCAAGCTTTATGCCCTCTCACCGACGACGGCAACAAGACCACCGTTCTCGACAGAAACTCCACCGATTTATTCGACAACCATTACTTCAAAAACTTGCTCAACCGGAAGGGCCTCTTGGGCTCCGACCAAATTCTGTTCTCCGACTCCGACGATGCTGCTCAGCCTCAAACCACCACTACAAAAGCCTTGGTCCAAGCTTATAGCTCTAACACCACGCTTTTCTTCGCCGACTTTGTCAAAGCCATGATCAAGATGGGGAATATAAGTCCACTCACCGGCTCCGCCGGTCAGATCCGAAACAACTGCAGACTCCTTAATTCCTCCTAA 1059 46.36 MSCCCLMAVSHSSLPLILCMDLKFGLCLFFVVMDEPSISSTRSQLTVDFYKSSCPNVLRTVRREVMNAIKNEMRMAASLLRLHFHDCFVNGCDGSVLLDGSDGEKFALPNINSLRGLEVVDRIKAALESSCPGVVSCADLLTIAARDSVLLSGGPSWKVLLGRRDGLVANKTGADQGLPSPFESVNGIINKFVDVGLDITDLVALSGAHTIGFARCAMFNNRLFNFSGSGSPDPTMESAMVSDLQALCPLTDDGNKTTVLDRNSTDLFDNHYFKNLLNRKGLLGSDQILFSDSDDAAQPQTTTTKALVQAYSSNTTLFFADFVKAMIKMGNISPLTGSAGQIRNNCRLLNSS 352
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 37022493 37027900 + CmPI595203_02g023500.1 Cmu02g2350 410399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g2350 352 FunFam Peroxidase 179 329 - -
Cmu02g2350 352 PRINTS Plant peroxidase signature 259 274 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2350 352 PRINTS Plant peroxidase signature 153 168 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2350 352 PRINTS Plant peroxidase signature 115 128 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2350 352 PRINTS Plant peroxidase signature 200 212 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2350 352 PRINTS Plant peroxidase signature 78 98 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2350 352 PRINTS Plant peroxidase signature 134 144 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2350 352 PRINTS Plant peroxidase signature 275 292 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2350 352 PRINTS Plant peroxidase signature 54 73 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2350 352 ProSiteProfiles Plant heme peroxidase family profile. 44 350 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2350 352 SUPERFAMILY Heme-dependent peroxidases 44 350 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2350 352 PRINTS Haem peroxidase superfamily signature 153 165 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2350 352 PRINTS Haem peroxidase superfamily signature 76 90 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2350 352 PRINTS Haem peroxidase superfamily signature 261 276 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2350 352 PRINTS Haem peroxidase superfamily signature 201 216 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2350 352 PRINTS Haem peroxidase superfamily signature 135 152 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2350 352 ProSitePatterns Peroxidases proximal heme-ligand signature. 201 211 IPR019793 -
Cmu02g2350 352 Gene3D Peroxidase, domain 2 179 332 - -
Cmu02g2350 352 Pfam Peroxidase 61 313 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2350 352 FunFam Peroxidase 48 189 - -
Cmu02g2350 352 CDD secretory_peroxidase 44 347 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cmu02g2350 352 ProSitePatterns Peroxidases active site signature. 76 87 IPR019794 GO:0004601(InterPro)
Cmu02g2350 352 PANTHER PEROXIDASE 72-RELATED 26 347 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2350 352 Gene3D - 50 350 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g1615 Cmu-Chr1:29853203 Cmu02g2350 Cmu-Chr2:37022493 4.30E-89 dispersed
Cmu02g2350 Cmu-Chr2:37022493 Cmu03g0648 Cmu-Chr3:720534 3.20E-82 dispersed
Cmu02g2350 Cmu-Chr2:37022493 Cmu02g2351 Cmu-Chr2:37032128 2.20E-83 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g2350 K00430 - csv:101211257 522.316