Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g2351 ATGTCGTCCTTCAAATTTGAAGCTTTAGCAGCCTTGTTGTTGTGTATGATGTTGAGGGGATGTTGGGCCCAACTCAGCCCTACCTTCTACGACCAATCTTGCCCTAATCTAACCGCCATAGTCAGAGATGCAATAAGCCAGGCATTCCAGGGTGATGTTCGAGCCGGAGCCAAGCTCATTCGCTTTCACTTCCACGATTGCTTCGTCAATGGTTGTGATGGATCGGTTTTACTAGAGAATCAAGATGGTGTGGAAAGCGAGTTAGATGCTCCAGGGAACCAAGGAATACAAGGCTTTGACATTGTCGACAACATAAAAGCTGCAGTTGAAGCTGCCTGCCCAAACACCGTGTCTTGTGCTGACATCTTAGCCCTTTCCTCTCGTGAATCTGTCATCTTGACGGGAGGGCCAAGTTGGGTAGTTCAATTGGGAAGAAGAGATAGCAGAAACGCAAATAGAACTGGAGCTGAAAACAATCTCCCAAGCCCTTTCGAAACACTCGATCAACTTCGGGTAAAATTTAATGCAGTTGGTCTCGATTCTACCGATCTTGTGGCTTTATCTGGAGCGCATACGTTCGGAAGGTCAAGATGCGTATTCTTCAGCGGGCGGCTAAGCAATTTCAGCGGTACCGGAAGTCCAGACCCGACTCTTGACCCGACGTTACGGGATGCACTGGTCATCGCTTGTCCGACCGGCGACGGAAACAACCGCATCGCACTTGACGTGGCGACGCCGGACAGCTTCGACAATGCATACTACACCAATCTGGTCAACAACCGTGGGCTTCTCCAATCGGATCAAGAGCTGTTCTCAACCGAAGGGGCGGAAACCATCGCCACCGTGAACCGTTTTGCCGGCAACCAATCTGATTTCTTTGGTCAGTTCGGTCAGTCTATGATAAACATGGGGAACCTCCAACCATTACTTGGGCCCAATGGAGAAATCAGGTCCAATTGTAGGCGGGTTAATCCTTTGAATATTACCACTGGTGCTGCTACTGCTTTTATGTAA 1014 49.21 MSSFKFEALAALLLCMMLRGCWAQLSPTFYDQSCPNLTAIVRDAISQAFQGDVRAGAKLIRFHFHDCFVNGCDGSVLLENQDGVESELDAPGNQGIQGFDIVDNIKAAVEAACPNTVSCADILALSSRESVILTGGPSWVVQLGRRDSRNANRTGAENNLPSPFETLDQLRVKFNAVGLDSTDLVALSGAHTFGRSRCVFFSGRLSNFSGTGSPDPTLDPTLRDALVIACPTGDGNNRIALDVATPDSFDNAYYTNLVNNRGLLQSDQELFSTEGAETIATVNRFAGNQSDFFGQFGQSMINMGNLQPLLGPNGEIRSNCRRVNPLNITTGAATAFM 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 37032128 37033508 + CmPI595203_02g023510.1 Cmu02g2351 410400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g2351 337 FunFam Peroxidase 161 303 - -
Cmu02g2351 337 SUPERFAMILY Heme-dependent peroxidases 24 325 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2351 337 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Cmu02g2351 337 ProSiteProfiles Plant heme peroxidase family profile. 24 324 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2351 337 CDD secretory_peroxidase 24 323 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cmu02g2351 337 PANTHER PEROXIDASE 72-RELATED 14 323 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2351 337 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2351 337 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2351 337 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2351 337 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2351 337 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2351 337 Gene3D - 29 324 - -
Cmu02g2351 337 FunFam Peroxidase 28 173 - -
Cmu02g2351 337 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2351 337 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2351 337 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2351 337 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2351 337 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2351 337 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2351 337 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2351 337 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2351 337 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2351 337 Pfam Peroxidase 41 287 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2351 337 Gene3D Peroxidase, domain 2 161 303 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g0465 Cmu-Chr1:4782827 Cmu02g2351 Cmu-Chr2:37032128 6.80E-114 dispersed
Cmu02g2351 Cmu-Chr2:37032128 Cmu02g2353 Cmu-Chr2:37047046 9.20E-111 dispersed
Cmu02g2350 Cmu-Chr2:37022493 Cmu02g2351 Cmu-Chr2:37032128 2.20E-83 tandem
Cmu02g2351 Cmu-Chr2:37032128 Cmu02g2352 Cmu-Chr2:37039075 2.20E-120 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g2351 K00430 - csv:101217743 586.645