Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g2352 ATGGAAATGGCTTCTTCTAAGTTTGGAGTAGTCTTGGCGTTGTTTTGGTTAGTGGGTTTGATGGTGGGAGGGTCCTTGGCTCAGCTAAACCCTTCATTTTACGCCAAAACATGTCCTAATTTACCCAAAATTGTAAATGGTGTGGTTGCACAGGCTCTGCGAACCGATGCTCGAGCTGGAGCCAAGCTGATTCGCCTCCATTTTCACGACTGCTTTGTTGATGGGTGCGATGCGTCTGTTTTGCTAGAGAACGCACCAGGCATAGACAGTGAACTTGATGCCCCTGGAAACCAAGGGATTCAAGGTCTTAACATTGTCGACGACATCAAATCTGCTGTCGAAAAGGCTTGCCCTCGCACTGTCTCTTGTGCCGACATCTTAGCCATAGCCTCCAAAGAATCTGTCGTACTGGCTGGAGGGCCTAGCTGGGTTGTGCCACTAGGGCGAAGAGACAGCAGAACAGCCAATAGAGAAGGAGCCTCAAACAACCTTGCCAGTCCCTTCGAAGATCTGGATACACTCAAAGCCAAGTTTGGTGTTTTTGGCCTCGATTCCACTGATCTTGTGGCTTTGTCTGGAGCACATACATTTGGGCGTTCAAGATGCGCATTTTTCAGCCAACGATTGGCCAACTTCAACGGCACGAACAGGCCAGATCCAACGCTAGACCCAGCCTACAGAGAGCAGCTCCGAAGAATTTGCTCTAGTGGCTCAGAGACACGAGCCAATTTCGACCCAACGACTCCGGACAAATTTGACAAAAACTATTATTCCAACCTTCAGGGGCTTCGGGGGCTGCTGCAGAGCGATCAAGAACTGTTCTCAACTCGCGGGGCTGACACGGTGGCCATTGTCAACCGTTTTGCCAAAAGCCAAGGCCAGTTCTTTAAAAGTTTTGGTGCGTCTATGATTAAAATGGGAAACATTACACCTTTAACTGGAACTAAAGGAGAGATTAGATTGAACTGTAGGAGGGTGAATCCAACTAGACCCAGGGGTGATGAGGGTCATGATGTTATGTAA 1023 48.68 MEMASSKFGVVLALFWLVGLMVGGSLAQLNPSFYAKTCPNLPKIVNGVVAQALRTDARAGAKLIRLHFHDCFVDGCDASVLLENAPGIDSELDAPGNQGIQGLNIVDDIKSAVEKACPRTVSCADILAIASKESVVLAGGPSWVVPLGRRDSRTANREGASNNLASPFEDLDTLKAKFGVFGLDSTDLVALSGAHTFGRSRCAFFSQRLANFNGTNRPDPTLDPAYREQLRRICSSGSETRANFDPTTPDKFDKNYYSNLQGLRGLLQSDQELFSTRGADTVAIVNRFAKSQGQFFKSFGASMIKMGNITPLTGTKGEIRLNCRRVNPTRPRGDEGHDVM 340
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 37039075 37040344 + CmPI595203_02g023520.1 Cmu02g2352 410401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g2352 340 FunFam Peroxidase 165 306 - -
Cmu02g2352 340 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2352 340 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2352 340 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2352 340 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2352 340 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2352 340 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2352 340 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2352 340 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2352 340 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2352 340 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601(InterPro)
Cmu02g2352 340 Gene3D - 33 327 - -
Cmu02g2352 340 SUPERFAMILY Heme-dependent peroxidases 28 328 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2352 340 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2352 340 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2352 340 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2352 340 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2352 340 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2352 340 Pfam Peroxidase 46 291 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2352 340 CDD secretory_peroxidase 28 326 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cmu02g2352 340 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Cmu02g2352 340 PANTHER PEROXIDASE 72-RELATED 19 326 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2352 340 FunFam Peroxidase 32 177 - -
Cmu02g2352 340 ProSiteProfiles Plant heme peroxidase family profile. 28 327 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2352 340 Gene3D Peroxidase, domain 2 165 306 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g2352 Cmu-Chr2:37039075 Cmu02g2357 Cmu-Chr2:37084431 9.20E-127 dispersed
Cmu02g2351 Cmu-Chr2:37032128 Cmu02g2352 Cmu-Chr2:37039075 2.20E-120 tandem
Cmu02g2352 Cmu-Chr2:37039075 Cmu02g2353 Cmu-Chr2:37047046 8.40E-120 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g2352 K00430 - csv:101211507 576.63