Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g2353 ATGGGTTCCCCTAAATTAACAGCCTTAGTTGCAGTGTTAGCTTTGATGCTGGGATCCTCTCAGGCTCAGCTTAACCCTTTCTTCTACACCTTCACATGCCCTCAGCTGCCTTTTGTTGTTCTAAATGTGGTCTCACAAGCTCTCCAAACCGATGATCGAGCAGCTGCCAAGCTCATTCGTCTTCACTTTCACGACTGCTTCGTCAATGGGTGTGACGGGTCTGTGCTACTAGAAGACGTACCGGGAGTCATCGATAGTGAATTAAACGCACCTCCCAACAACGGAATCCAAGGGCTGGACATTGTGGACAACATCAAAGCAGCAGTTGAAAGCGCTTGCCCGGGCGTTGTCTCCTGTGCTGACATCTTAGCGCTCTCAGCTCAAGTTTCTGTCGTATTGTCTGGAGGGCCGGCATGGGTTGTTCCACTGGGAAGAAAAGACAGCAGAAGAGCAAACAGAACTGCAGCTGCAAATCTTCCGAGTCCATTTGAAACTCTAGACGTGTTGAAAGCCAAATTTGCGGCACTTGGGCTGGGTTCTACAGATTTGGTGACTCTATCAGGAGCCCACACATTTGGTCGATCCAGATGCCTCTTTTTCACAGGACGGTTCGACAATTTCAATAACACTGGTCTGCCAGACCCTACTCTGGATGCTGCTTACAGGGAGCAGCTCCGTCAAGCTTGTACCACTCCTGGAACGCGAGTAAGCTTTGACCCGATCACACCAGACACCTTTGATAAAAACTACTACATTAATCTTCAAAATCACAAAGGACTTCTCCAAAGTGATCAAGAGCTTTTCTCAACTCCCGGGGCTGATACAACTGCCATTGTCAATACATTTGCCGCTAGCCAGCTTTTGTTCTTCATTCAATTTGGGAATTCCATGATTAAAATGGGAAATCTGAGCCCTCCACCTGGTATCCCATCTGAAGTCAGATTGAACTGTAGAAAGGTCAACCCACCCACTGTTCTACATGATGTTATCTAA 993 47.53 MGSPKLTALVAVLALMLGSSQAQLNPFFYTFTCPQLPFVVLNVVSQALQTDDRAAAKLIRLHFHDCFVNGCDGSVLLEDVPGVIDSELNAPPNNGIQGLDIVDNIKAAVESACPGVVSCADILALSAQVSVVLSGGPAWVVPLGRKDSRRANRTAAANLPSPFETLDVLKAKFAALGLGSTDLVTLSGAHTFGRSRCLFFTGRFDNFNNTGLPDPTLDAAYREQLRQACTTPGTRVSFDPITPDTFDKNYYINLQNHKGLLQSDQELFSTPGADTTAIVNTFAASQLLFFIQFGNSMIKMGNLSPPPGIPSEVRLNCRKVNPPTVLHDVI 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 37047046 37048298 + CmPI595203_02g023530.1 Cmu02g2353 410402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g2353 330 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2353 330 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2353 330 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2353 330 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2353 330 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2353 330 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2353 330 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2353 330 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2353 330 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2353 330 ProSiteProfiles Plant heme peroxidase family profile. 23 321 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2353 330 SUPERFAMILY Heme-dependent peroxidases 23 322 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2353 330 FunFam Peroxidase 27 172 - -
Cmu02g2353 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Cmu02g2353 330 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601(InterPro)
Cmu02g2353 330 Gene3D - 28 321 - -
Cmu02g2353 330 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2353 330 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2353 330 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2353 330 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2353 330 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2353 330 Pfam Peroxidase 41 284 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2353 330 Gene3D Peroxidase, domain 2 160 300 - -
Cmu02g2353 330 PANTHER PEROXIDASE 72-RELATED 11 320 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2353 330 FunFam Peroxidase 160 300 - -
Cmu02g2353 330 CDD secretory_peroxidase 23 320 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g2351 Cmu-Chr2:37032128 Cmu02g2353 Cmu-Chr2:37047046 9.20E-111 dispersed
Cmu02g2353 Cmu-Chr2:37047046 Cmu02g2357 Cmu-Chr2:37084431 1.90E-113 dispersed
Cmu02g2352 Cmu-Chr2:37039075 Cmu02g2353 Cmu-Chr2:37047046 8.40E-120 tandem
Cmu02g2353 Cmu-Chr2:37047046 Cmu02g2354 Cmu-Chr2:37051231 1.00E-138 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g2353 K00430 - csv:101211752 600.127