Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g2357 ATGGCCTCCGCCAATGCCGCAGCCTCCTTTTTCTTTCTGGCTCTTCTCTTCGGAGGCTCTTTAGCTCAACTCTCCGAGACCTTTTACGATCAAACCTGCCCTCGCCTCCCCAACATTGTCCGTGCCTCCGTCAAAAGAGCTATCGAAACCGACATCCGTGCCGGTGCTAAACTCATCCGCCTCCATTTTCATGACTGCTTCGTCAATGGATGTGATGGCTCTGTTTTGCTAGAAGATGCTCCTGGCATAGTCAGTGAGCTCAACTCACCTGGAAATCAAGGAATCCAAGGCCTCGAGATTGTTGACGCCATTAAAGCCGACGTTGAGAGGGAATGCCCCGGCATCGTCTCCTGTGCCGACATTCTGGCTCAAGCTTCCAAGGACTCTGTCGATGTGCAAGGAGGGCCTAGTTGGAGAGTGTTATACGGAAGACGAGACAGTAGAATAGCGAACAAAACAGGGGCGGATAGTGGGTTGGCCAGTCCCTTCGAAACTCTAGACCAACTCAAAGCTAAATTTGCTGCTGTTGGCCTTGGTACCACTGATCTCGTCGCTTTATCAGGAGCGCATACGTTTGGTCGATCGAGATGCAGATTCTTCAGCCACCGATTTGCGAATTTCAACAACACTGGAAGGCCAGACCCATCACTGGATGCTAACTACAGAGGATTCCTTGAAGGGGTTTGCTCAGCAGGTCCAGACACAAGAGCCAACTTCGACCCAGTAACACCTGACGTGTTCGACAAAAACTACTACACAAATCTTCAAGTTGGGAAGGGGCTTCTGCAAAGTGACCAAGAGCTGTTCTCTACTCCAGGGGCTGACACCATCGCCATTGTCAACAGCTTCGCAGCCAGAGAAGGCACCTTCTTCAAGGAGTTCCGGCAGTCCATGATCAACATGGGGAACATCAAGCCTTTGACTGGTAGCCGTGGGGAAATTAGAAGAAACTGCAGGAGGGTTAACTCTGGGTTGGGTGGAGAAGGGCATGATGTTATGTAA 1002 51.0 MASANAAASFFFLALLFGGSLAQLSETFYDQTCPRLPNIVRASVKRAIETDIRAGAKLIRLHFHDCFVNGCDGSVLLEDAPGIVSELNSPGNQGIQGLEIVDAIKADVERECPGIVSCADILAQASKDSVDVQGGPSWRVLYGRRDSRIANKTGADSGLASPFETLDQLKAKFAAVGLGTTDLVALSGAHTFGRSRCRFFSHRFANFNNTGRPDPSLDANYRGFLEGVCSAGPDTRANFDPVTPDVFDKNYYTNLQVGKGLLQSDQELFSTPGADTIAIVNSFAAREGTFFKEFRQSMINMGNIKPLTGSRGEIRRNCRRVNSGLGGEGHDVM 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 37084431 37085689 + CmPI595203_02g023570.1 Cmu02g2357 410406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g2357 333 PANTHER PEROXIDASE 72-RELATED 13 321 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2357 333 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2357 333 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2357 333 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2357 333 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2357 333 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2357 333 FunFam Peroxidase 27 173 - -
Cmu02g2357 333 FunFam Peroxidase 160 301 - -
Cmu02g2357 333 CDD secretory_peroxidase 23 321 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cmu02g2357 333 SUPERFAMILY Heme-dependent peroxidases 23 322 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2357 333 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2357 333 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2357 333 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2357 333 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2357 333 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2357 333 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2357 333 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2357 333 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2357 333 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2357 333 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Cmu02g2357 333 ProSiteProfiles Plant heme peroxidase family profile. 23 322 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2357 333 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601(InterPro)
Cmu02g2357 333 Gene3D - 28 322 - -
Cmu02g2357 333 Gene3D Peroxidase, domain 2 160 301 - -
Cmu02g2357 333 Pfam Peroxidase 40 285 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g2352 Cmu-Chr2:37039075 Cmu02g2357 Cmu-Chr2:37084431 9.20E-127 dispersed
Cmu02g2353 Cmu-Chr2:37047046 Cmu02g2357 Cmu-Chr2:37084431 1.90E-113 dispersed
Cmu02g2354 Cmu-Chr2:37051231 Cmu02g2357 Cmu-Chr2:37084431 6.00E-107 dispersed
Cmu02g2355 Cmu-Chr2:37058650 Cmu02g2357 Cmu-Chr2:37084431 5.80E-142 dispersed
Cmu02g2357 Cmu-Chr2:37084431 Cmu02g2359 Cmu-Chr2:37103385 5.30E-103 dispersed
Cmu02g2356 Cmu-Chr2:37071284 Cmu02g2357 Cmu-Chr2:37084431 1.10E-135 tandem
Cmu02g2357 Cmu-Chr2:37084431 Cmu02g2358 Cmu-Chr2:37093525 6.10E-107 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g2357 K00430 - csv:101217543 592.038