Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g2358 ATGGCTTCCTTCTTCAAAGTTGTTTCTTTCCTTTTGTTTGTGGGGTTGATGGTTAAAGCTTCTAAAGCTCAGCTCTGTCCCACGTTTTACGACGACTCATGCCCCGACGTATCCAACATTGTGCGCAGTGTAGTGCAGCAAGCTTTGGAAACTGACGACCGTGCTGGTGCCAGACTCATTCGACTTCATTTCCACGACTGCTTTGTTGATGGGTGCGATGGGTCAGTTTTACTAGTGAACCAAACCGGCGTAGTGAGTGAGCTTGGCGCTCCTGGAAATGCCAATATTACAGGATTTAACATTGTTGATGACATTAAAGCCGCACTCGAGGAGGCTTGTCCTGGTGTTGTTTCTTGTGCCGACATTTTAGCCATAGCTTCTGTGGAAGCAGTTTCCTTGGCAGGAGGACCGTGTTGGGAGGTTCAACTGGGAAGAAGGGACAGCAGAACGGCTAACTTACAAGGCGCAATCAATGGGCTTCCAAGTCCCTTCGAAAATGTTACAGAACTTAAACGCAAGTTTGGTAGAGTGGGTCTTGATTCTACCGATCTTGTTGCCTTATCTGGGGCCCACACATTCGGGAGAGCAAGATGCCGATTTTTCGACGGACGTTTGAACGTTTCAAATCCAGACGCCACGCTGGACGCCACGTACGCACAGCAGCTCCGTGAGGCTTGCAGTGGGAGCAGAGACACGTTTGTAAACCTGGACCCCACCACTCCCGACGACTTCGACAACAACTACTACACAAACCTTCAGTCCAACTCCGGTCTTCTCACCAGCGACCAAGTCCTCTTCTCCACTCCCGGCGCCGACACCGTAGACACCGTCAACATCTTCGCCGGCAGCCAGCAGCAGTTCTTCGACAGCTTCGGCCAGTCCATGATCAACATGGGAAATATCAGCCCTTTAACCGGTGACCAGGGAGAAATTAGGTCCAATTGCCGAAGGCTCAACTGA 960 50.94 MASFFKVVSFLLFVGLMVKASKAQLCPTFYDDSCPDVSNIVRSVVQQALETDDRAGARLIRLHFHDCFVDGCDGSVLLVNQTGVVSELGAPGNANITGFNIVDDIKAALEEACPGVVSCADILAIASVEAVSLAGGPCWEVQLGRRDSRTANLQGAINGLPSPFENVTELKRKFGRVGLDSTDLVALSGAHTFGRARCRFFDGRLNVSNPDATLDATYAQQLREACSGSRDTFVNLDPTTPDDFDNNYYTNLQSNSGLLTSDQVLFSTPGADTVDTVNIFAGSQQQFFDSFGQSMINMGNISPLTGDQGEIRSNCRRLN 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 37093525 37095580 + CmPI595203_02g023580.1 Cmu02g2358 410407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g2358 319 FunFam Peroxidase 161 298 - -
Cmu02g2358 319 PRINTS Haem peroxidase superfamily signature 237 252 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2358 319 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2358 319 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2358 319 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2358 319 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2358 319 PRINTS Plant peroxidase signature 251 268 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2358 319 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2358 319 PRINTS Plant peroxidase signature 235 250 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2358 319 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2358 319 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2358 319 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2358 319 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2358 319 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2358 319 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2358 319 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Cmu02g2358 319 PANTHER PEROXIDASE 72-RELATED 14 317 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2358 319 FunFam Peroxidase 28 177 - -
Cmu02g2358 319 Gene3D - 29 319 - -
Cmu02g2358 319 Pfam Peroxidase 41 281 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2358 319 CDD secretory_peroxidase 24 317 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cmu02g2358 319 SUPERFAMILY Heme-dependent peroxidases 24 319 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2358 319 Gene3D Peroxidase, domain 2 161 298 - -
Cmu02g2358 319 ProSiteProfiles Plant heme peroxidase family profile. 24 319 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2358 319 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g2358 Cmu-Chr2:37093525 Cmu11g0585 Cmu-Chr11:6426450 3.80E-74 dispersed
Cmu02g2357 Cmu-Chr2:37084431 Cmu02g2358 Cmu-Chr2:37093525 6.10E-107 tandem
Cmu02g2358 Cmu-Chr2:37093525 Cmu02g2359 Cmu-Chr2:37103385 7.10E-129 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g2358 K00430 - csv:101212717 527.324