Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g2359 ATGGCTTCTTTTAACGCTATTATTCCTTTGATATTGTGTGTTTGTTTGATGGTTGGCTCTGTCAGTGCTCAACTTAGCTCTACGTTTTACGATACCACATGTCCCAATGTATCAAGTGTTGTGCATGGTGTTGTGGAGCAAGCTCTTCAAAATGATGATAGAGCCGGCGCCAAACTCATTCGTCTCCATTTCCACGATTGTTTTGTCGATGGTTGCGATGGGTCAGTATTGTTAGAGGACCAAGATGGTATAGTGAGCGAGTTGGGTGCACCTGGAAACGGAGGCATCACGGGATTCAATATTGTCAATGACATCAAAACTGCAGTAGAAAATGTTTGTCCAGGCATCGTCTCTTGTGCTGACATTCTAGCCCTTTCTTCTCGAGATGCCGTCACCTTGGCAGGAGGGCAAGGCTGGACGGTTCAATTGGGAAGAAGAGATAGTAGAACAGCTAATTTGCAAGGAGCCAGGGATAGGCTCCCAAGTCCTTTTGAGAATCTATCTCAACTTCAACAAAAGTTTAGGGATGTTCAACTTGACGATGATATCGATCTTGTTGCTCTATCAGGTGCACACACAATCGGGCGTTCGAGATGCAGATTTTTCGACGGACGGCTAAACACTTCGAACCCAGACCCGACGCTGGACTCGACGTACGCGGATCAGCTCCGGCAAAGTTGTCAGGCAGGGCGAGACACATTTGTGAATCTGGACCCGACGACGCCGAACACATTCGACAGGAACTACTTCACAAATCTTCAAAACAACCAAGGGCTTTTGGGAAGTGACCAAGTTCTATTCTCCACCGACGGAGCTTCAACTATCAGTACCGTCAACAACTTCGCCGGCAGCCAGAGCGCATTCTTCACCGCCTTTGCTCAGTCAATGATTAATATGGGAAATCTCAGCCCTTTGACTGGGACTAGTGGAGAAATCAGGACCAATTGCAGAAGGCTGAATTAA 963 47.14 MASFNAIIPLILCVCLMVGSVSAQLSSTFYDTTCPNVSSVVHGVVEQALQNDDRAGAKLIRLHFHDCFVDGCDGSVLLEDQDGIVSELGAPGNGGITGFNIVNDIKTAVENVCPGIVSCADILALSSRDAVTLAGGQGWTVQLGRRDSRTANLQGARDRLPSPFENLSQLQQKFRDVQLDDDIDLVALSGAHTIGRSRCRFFDGRLNTSNPDPTLDSTYADQLRQSCQAGRDTFVNLDPTTPNTFDRNYFTNLQNNQGLLGSDQVLFSTDGASTISTVNNFAGSQSAFFTAFAQSMINMGNLSPLTGTSGEIRTNCRRLN 320
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 37103385 37104896 + CmPI595203_02g023590.1 Cmu02g2359 410408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g2359 320 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2359 320 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2359 320 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2359 320 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2359 320 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2359 320 CDD secretory_peroxidase 24 318 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cmu02g2359 320 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2359 320 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2359 320 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2359 320 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2359 320 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2359 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2359 320 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2359 320 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2359 320 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2359 320 Pfam Peroxidase 42 283 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2359 320 SUPERFAMILY Heme-dependent peroxidases 24 320 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2359 320 PANTHER PEROXIDASE 72-RELATED 14 318 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2359 320 FunFam Peroxidase 161 299 - -
Cmu02g2359 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Cmu02g2359 320 ProSiteProfiles Plant heme peroxidase family profile. 24 320 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g2359 320 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601(InterPro)
Cmu02g2359 320 FunFam Peroxidase 28 177 - -
Cmu02g2359 320 Gene3D - 29 320 - -
Cmu02g2359 320 Gene3D Peroxidase, domain 2 161 299 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g2356 Cmu-Chr2:37071284 Cmu02g2359 Cmu-Chr2:37103385 1.80E-106 dispersed
Cmu02g2357 Cmu-Chr2:37084431 Cmu02g2359 Cmu-Chr2:37103385 5.30E-103 dispersed
Cmu02g2359 Cmu-Chr2:37103385 Cmu11g0585 Cmu-Chr11:6426450 7.50E-78 dispersed
Cmu02g2358 Cmu-Chr2:37093525 Cmu02g2359 Cmu-Chr2:37103385 7.10E-129 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g2359 K00430 - csv:101212957 515.768