Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu03g0628 ATGGGGAAATTGAGTTGCTCCTCAAGGCTGAAGGTGTATTGTTTCCCTTTAGTTTTTTATGTATTTGAAATGAAAGAAGTTTCTTTCAGAACCATGGCAGATGAAGTTCAGAATGATGTGAATGATCAGGTGGCAGATATTGCCCCCTTTGATCCCACTAAGAAGAAGAAGAAGAAGAAGGTTGTGCTTCAGGATCCGACTGATGAGGTTGTTGATAAGTTAGCGGAGAAAACTGAAAGTTTGTCTGTTTCTGATGGTTTGGAGACTACCACATTTTCTGGACTTAAAAAGAAGAAGAAAAAACCAGTAGAGGCTAGCTCCTTGAATGATGATGGTGCAGATGCTACGGAGGATTTGGAAGATCAAGCGGGGGAAAATGAAGAGCGTGAGGGAATTGTTCTACAATATCGTTATCCTTGGGAGGGAAGTGATCGCGATTATGAATATGAGGAGCTTCTTGGACGGGTATTCAATATTCTTAGAGAGAATAATCCAGAACTTGCAGGCGATAGGCGTAGAACAGTTATGAGGCCTCCTCAAGTTCTTCGTGAAGGCACAAAGAAAACTGTTTTTGTCAATTTCATGGATCTATGTAAAACGATGCACCGGCAGCCAGATCATGTTATGGCTTTCTTACTAGCCGAACTGGGAACCAGTGGCTCTCTTGATGGACAGCAGAGATTAGTTGTTAAAGGAAGGTTTGCACCAAAGAACTTCGAAGGAATTCTGCGTCGATACGTCAATGAATATGTGATTTGCATTGGGTGCAAGAGTCCGGACACTATCCTTTCAAAGGAGAACCGACTTTTCTTTCTCAGATGCGAGAAGTGTGGTTCTGGACGATCAGTTGCTCCAATTAAAGCTGGATTTGTGGCTCGTGTTGGCCGGAGGAACACTGGGACATGA 906 43.05 MGKLSCSSRLKVYCFPLVFYVFEMKEVSFRTMADEVQNDVNDQVADIAPFDPTKKKKKKKVVLQDPTDEVVDKLAEKTESLSVSDGLETTTFSGLKKKKKKPVEASSLNDDGADATEDLEDQAGENEEREGIVLQYRYPWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICIGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNTGT 301
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 548155 554897 + CmPI595203_03g006280.1 Cmu03g0628 411414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu03g0628 301 FunFam Eukaryotic translation initiation factor 2 subunit 144 286 - -
Cmu03g0628 301 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 146 253 IPR016189 GO:0003743(InterPro)|GO:0006413(InterPro)
Cmu03g0628 301 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 250 285 IPR016190 GO:0003743(InterPro)|GO:0006413(InterPro)
Cmu03g0628 301 Pfam Domain found in IF2B/IF5 170 279 IPR002735 GO:0003743(InterPro)|GO:0006413(InterPro)
Cmu03g0628 301 Gene3D - 144 286 - -
Cmu03g0628 301 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 56 287 IPR045196 GO:0001731(PANTHER)|GO:0001732(PANTHER)|GO:0003729(PANTHER)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0005850(PANTHER)|GO:0006413(InterPro)|GO:0031369(PANTHER)
Cmu03g0628 301 MobiDBLite consensus disorder prediction 111 125 - -
Cmu03g0628 301 SMART eIF2Bneu4 171 280 IPR002735 GO:0003743(InterPro)|GO:0006413(InterPro)
Cmu03g0628 301 MobiDBLite consensus disorder prediction 94 130 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu03g0628 K03238 - csv:101220978 519.62