Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu03g0648 ATGGAATCAAAGTGTAGCAAGTTATGGTGTGCTTTGGTGTTTGCTTCTTTGATAACTCTAAGCTCTGGCAGTTTATCCGCTACCTACTATAAGAGTTCATGTCCAAAGTTACTCTCCATTGTTCGACGTGAAGTTGTGAAAGCAGTAGACAAAGAGTACAGAATGGGAGCATCGTTGCTTCGCCTCTATTTTCACGACTGTTTTGTCAATGGATGTGATGCGTCAGTGCTATTGGACGACACGTCAAACTTCACTGGAGAAAAGACAGCAATCCCAAACAAAGATTCGTTGAGAGGTTTTGAAGTAATCGACTCAATTAAAACGCTAGTGGAAGCTGCTTGTCCTTCTGTGGTTTCTTGTGCTGATATTTTGTCCCTTGCAGCCCGAGACTCGGTGGTTACCCTTGGGGGGCCTTCGTGGGTAGTTGGACTTGGGCGGAGGGACTCGACCACAGCCAGCTTCGACAGCGCAAACAATGATCTTCCTTCTCCCTTCCTCGACCTTCCCGATCTCATCTCTGCCTTTTCCAACAAAGGCTTCGACACCAAAGAATTGGTCGCCCTTTCAGGATCTCACACGATCGGACAAGCCAGGTGCTCTATGTTCAGAGTAAGAGCCCATAACGAAACCACCACCATTGATTCAGATTTTGCAGCCTCTCTAAGATCCAATTGCCCTTTCTCCGGCGACGACCAAAGTCTTTCTCCTTTGGATCTCAAAACCCAATCCTTATTCGACAATGCTTATTTCAAGAACTTGGTCCAAAACAAAGGCCTTCTTCATTCCGACCAAGCCCTCTTCAGCAACTCCTCCGCCGATTCTCATGTCACTTCCTATGTCTCCGACTCTTCTGCTTTCTTCTCCGACTTCGCCGCCGCCATGGTTAAGATGTCCAACCTCTCCCCGCTCACCGGCTCCGACGGCCAGATTCGTTCCGACTGCCGCAAAATTAACTAA 957 47.96 MESKCSKLWCALVFASLITLSSGSLSATYYKSSCPKLLSIVRREVVKAVDKEYRMGASLLRLYFHDCFVNGCDASVLLDDTSNFTGEKTAIPNKDSLRGFEVIDSIKTLVEAACPSVVSCADILSLAARDSVVTLGGPSWVVGLGRRDSTTASFDSANNDLPSPFLDLPDLISAFSNKGFDTKELVALSGSHTIGQARCSMFRVRAHNETTTIDSDFAASLRSNCPFSGDDQSLSPLDLKTQSLFDNAYFKNLVQNKGLLHSDQALFSNSSADSHVTSYVSDSSAFFSDFAAAMVKMSNLSPLTGSDGQIRSDCRKIN 318
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 720534 722474 + CmPI595203_03g006480.1 Cmu03g0648 411434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu03g0648 318 FunFam Peroxidase 162 297 - -
Cmu03g0648 318 Gene3D Peroxidase, domain 2 162 297 - -
Cmu03g0648 318 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu03g0648 318 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu03g0648 318 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu03g0648 318 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu03g0648 318 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu03g0648 318 PANTHER PEROXIDASE 72-RELATED 14 317 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu03g0648 318 ProSiteProfiles Plant heme peroxidase family profile. 24 318 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu03g0648 318 SUPERFAMILY Heme-dependent peroxidases 25 318 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu03g0648 318 CDD secretory_peroxidase 25 317 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cmu03g0648 318 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Cmu03g0648 318 Gene3D - 28 318 - -
Cmu03g0648 318 Pfam Peroxidase 41 281 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu03g0648 318 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601(InterPro)
Cmu03g0648 318 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu03g0648 318 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu03g0648 318 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu03g0648 318 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu03g0648 318 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu03g0648 318 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu03g0648 318 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu03g0648 318 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu03g0648 318 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu03g0648 318 FunFam Peroxidase 28 164 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g2350 Cmu-Chr2:37022493 Cmu03g0648 Cmu-Chr3:720534 3.20E-82 dispersed
Cmu03g0648 Cmu-Chr3:720534 Cmu07g0315 Cmu-Chr7:3091387 6.20E-93 dispersed
Cmu08g1273 Cmu-Chr8:25051448 Cmu03g0648 Cmu-Chr3:720534 2.70E-17 dispersed
Cmu11g0585 Cmu-Chr11:6426450 Cmu03g0648 Cmu-Chr3:720534 1.20E-99 wgd
Cmu02g1910 Cmu-Chr2:33009472 Cmu03g0648 Cmu-Chr3:720534 5.60E-94 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu03g0648 K00430 - csv:101221157 559.681