Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu03g0658 ATGGAGAAAGAAAATCTTGAAGAGAAAGAGGCAATGATGTACTTATCGTTGAAGATGAAGTTTCGTCATTGTGAGATTTTGCAATTTGCTAAACCATTGATAAAGCAAATATTCCTTCTTCTTCTTCCACAACCAATCCAATATCCAATATCTCACCAAACCAAACTGTCAACTCAACAACTCAAGAAGAGTGAAGAAGTGAAAGCTAAGTCCATCTCGCCATTGCACACCCAAATCTCTTCTTCACCACACACATGTCGACCACCCACGACCCCCAACTGGTCTGCGTCACCGGCGCCAGTGGCTGTATCGGATCCTGGCTCGTTCACCTCCTCCTCCTCCGCGGCTACTCCGTTCACGCCACCCTCCAAAATCTCAGTTACCCTCCCACTTTCTTCCCTATCTTCCGAGGACGAGAGCGAAACCAAGCATCTGGAAGATTTAGAGGGAGCAGAGGCTCGTCTTCGTCTCTTCCAAATCGACCTCCTCGATTATGACTCCATTGTCCCCGCCGTCACTGGTTGTGCTGGCGTCTTCCACGTCGCGTCTCCTTGCATCGTTGATCCTGTACAAGATCCTGAGAGGGATTTATTGGATCCGGCTATCAAAGGAACCATCAATGTCCTGACGGCGGCCAAGGAGGCTGGGGTACAACGCGTAGTGGTGACTTCTTCTATCTCAGCCATGATTCCGAACCCTAACTGGCCGGCGAATGTTGTAAGGAATGAAGAATGTTGGACCGATATTGATTACTGCAAGAAAAAGGGGCTGTGGTATTCAATTTCAAAAACTCTAGCAGAAAAGGCTGCTTGGGATTTTGCTAAGGAGAAAGGATTGGATGTGGTGGTGATTAATCCAGGCACAGTGATGGGCCCTGTGTTTCCTCCCAGAATTAATGCCAGCATGCAAATGCTTTTAAAACTTCTTCAGGGGTGCAGTGAGACATTCGAGGACGTTTTTATCGGAGTAGTGCACTTTAAAGATGTTGCATTAGCACACATTTTGGTCTATGAAAACAAATCAGCTACAGGAAGGCACTTTTGTGCTGAGGCCATAGCTCGTTACTCTGACTATGTAGCGAAGGCTGCTGAACTCTTCCCTCAGTATAATGTGCCCAGATCGGTAGAAGATACACAGCCTGATTTGGTGAGAGCAAAAGATGGAGCCAAGAAGTTGATGAACCTGGGGCTGGAATTCATCCCAATGGAACAAATTCTCAAGGAAGCCTCTGAATTTCATGAAAATGTCGATGAATGA 1257 46.7 MEKENLEEKEAMMYLSLKMKFRHCEILQFAKPLIKQIFLLLLPQPIQYPISHQTKLSTQQLKKSEEVKAKSISPLHTQISSSPHTCRPPTTPNWSASPAPVAVSDPGSFTSSSSAATPFTPPSKISVTLPLSSLSSEDESETKHLEDLEGAEARLRLFQIDLLDYDSIVPAVTGCAGVFHVASPCIVDPVQDPERDLLDPAIKGTINVLTAAKEAGVQRVVVTSSISAMIPNPNWPANVVRNEECWTDIDYCKKKGLWYSISKTLAEKAAWDFAKEKGLDVVVINPGTVMGPVFPPRINASMQMLLKLLQGCSETFEDVFIGVVHFKDVALAHILVYENKSATGRHFCAEAIARYSDYVAKAAELFPQYNVPRSVEDTQPDLVRAKDGAKKLMNLGLEFIPMEQILKEASEFHENVDE 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 768605 772229 + CmPI595203_03g006580.1 Cmu03g0658 411444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu03g0658 418 Pfam NAD dependent epimerase/dehydratase family 145 346 IPR001509 -
Cmu03g0658 418 MobiDBLite consensus disorder prediction 71 118 - -
Cmu03g0658 418 Gene3D - 131 417 - -
Cmu03g0658 418 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 130 409 IPR050425 GO:0016616(PANTHER)
Cmu03g0658 418 FunFam Dihydroflavonol reductase 132 415 - -
Cmu03g0658 418 MobiDBLite consensus disorder prediction 67 118 - -
Cmu03g0658 418 CDD FR_SDR_e 142 397 - -
Cmu03g0658 418 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 135 411 IPR036291 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g0658 Cmu-Chr3:768605 Cmu10g1567 Cmu-Chr10:11584086 1.70E-77 dispersed
Cmu03g0658 Cmu-Chr3:768605 Cmu11g1890 Cmu-Chr11:30921141 6.00E-51 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu03g0658 - - - 0.0