Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu03g0687 | ATGTCTGTCTCCGTTGCGGTTTCGAATTCGCCGGGATTTTCTCCTTCGTCTATGTTCTGCAACAAGACGTCGATCATTTCTCCGGCGCCGGAGGCTCTCACGCTTACTTTAGCCCATTTAAAGTCGTCGCAGGCTTCTTCGTCTTGCTCTTCTTCCCCTTCTTCGCCTTCTTCCCCTTTTCGGATTAGGTTTCCCAAGCCCCCTTCTGGGCTTTCGGCGGCAGCGGCAGCGGTGGCGGTGGCTTCCACTTCTTCTCCTTCGTCGTCGTCGTCAAGCGCGATCTTGAAGAGGAAGAGACCGGCTAGGTTGGATATTCCGTTGACGCCATTGAGTTTTGGGGCTCCGGTGATGCCGTCGCCATCGTCGTTCAGGGAGGTGGTGGAGGCCGAGAGAGATGGGTATTCCGTGTATTGTAAGAGAGGGAGGAGGAGAATTGCGATGGAAGATCGCTATTCTGCCGCTATTGATCTTCGAGGAAATTCCAAAGAGGGGTTTTTTGGTGTATTTGATGGACATGGAGGTGCGAAGGCTGCAGAATTTGCAGCAAATAACTTAGAGAAGAACGTTATGAATGAAATTGAAAGACTGGCTGATAATGAAACTGATTTTGAACAAGCCATTAAACATGGCTACCTCACCACAGATTCTGATTTCCTCAAGGAGGATCAACGTGGTGGTTCATGTTGTGTGACAGCCTTGATCAAGAAAGGCAACCTTGTTATCTCCAACGCCGGTGACTGCCGTGCCGTTCTCAGCAGCCAAGGTGTTGCCGAGGCCATCACCTCCGACCACCGCCCGTCTCGGGAAGATGAAAGGCGCAGGATCGAGTCCACGGGTGGATATGTTGATTTGTGCAATGGCATTTGGAGAGTCCAGGGATCTCTAGCTGTAACTAGAGCAATTGGGGATGCTCACCTCAAACAATGGGTGATAGCAGAGCCGGAGACGAGGGAAATTCGGATCGAACCTCGACACGAGTTCTTGATCTTGGCCTCAGACGGATTATGGGAAACGGTGAGCAATCAAGAAGCAGTGGACATTGCACATCCGTTGTGTGTGGGGATTGAGAAGGCAAAGCCATTGATGGCATGTAAAAAGCTTGTGGAGCTCTCACTTTCAAGAGGTTCAGTTGATGACATTAGTGTAGTACTGATTCAATTGGCTAACTTCATCTAA | 1176 | 50.26 | MSVSVAVSNSPGFSPSSMFCNKTSIISPAPEALTLTLAHLKSSQASSSCSSSPSSPSSPFRIRFPKPPSGLSAAAAAVAVASTSSPSSSSSSAILKRKRPARLDIPLTPLSFGAPVMPSPSSFREVVEAERDGYSVYCKRGRRRIAMEDRYSAAIDLRGNSKEGFFGVFDGHGGAKAAEFAANNLEKNVMNEIERLADNETDFEQAIKHGYLTTDSDFLKEDQRGGSCCVTALIKKGNLVISNAGDCRAVLSSQGVAEAITSDHRPSREDERRRIESTGGYVDLCNGIWRVQGSLAVTRAIGDAHLKQWVIAEPETREIRIEPRHEFLILASDGLWETVSNQEAVDIAHPLCVGIEKAKPLMACKKLVELSLSRGSVDDISVVLIQLANFI | 391 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 1053201 | 1054740 | - | CmPI595203_03g006870.1 | Cmu03g0687 | 411473 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu03g0687 | 391 | ProSiteProfiles | PPM-type phosphatase domain profile. | 133 | 387 | IPR001932 | - | |
Cmu03g0687 | 391 | CDD | PP2Cc | 133 | 387 | IPR001932 | - | |
Cmu03g0687 | 391 | SUPERFAMILY | PP2C-like | 133 | 388 | IPR036457 | - | |
Cmu03g0687 | 391 | SMART | PP2C_SIG_2 | 142 | 387 | IPR001932 | - | |
Cmu03g0687 | 391 | FunFam | probable protein phosphatase 2C 25 | 126 | 390 | - | - | |
Cmu03g0687 | 391 | Gene3D | - | 134 | 390 | IPR036457 | - | |
Cmu03g0687 | 391 | PANTHER | PROTEIN PHOSPHATASE | 121 | 385 | IPR015655 | GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Cmu03g0687 | 391 | Coils | Coil | 182 | 202 | - | - | |
Cmu03g0687 | 391 | ProSitePatterns | PPM-type phosphatase domain signature. | 165 | 173 | IPR000222 | GO:0043169(InterPro) | |
Cmu03g0687 | 391 | SMART | PP2C_4 | 126 | 385 | IPR001932 | - | |
Cmu03g0687 | 391 | Pfam | Protein phosphatase 2C | 138 | 380 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu03g0687 | Cmu-Chr3:1053201 | Cmu11g0873 | Cmu-Chr11:11452378 | 7.20E-67 | dispersed | |
Cmu05g1017 | Cmu-Chr5:9365112 | Cmu03g0687 | Cmu-Chr3:1053201 | 1.90E-22 | transposed | |
Cmu07g0112 | Cmu-Chr7:936068 | Cmu03g0687 | Cmu-Chr3:1053201 | 8.30E-20 | transposed | |
Cmu08g1699 | Cmu-Chr8:28501960 | Cmu03g0687 | Cmu-Chr3:1053201 | 8.90E-63 | transposed | |
Cmu10g2378 | Cmu-Chr10:30200097 | Cmu03g0687 | Cmu-Chr3:1053201 | 1.30E-30 | transposed | |
Cmu03g0687 | Cmu-Chr3:1053201 | Cmu07g0481 | Cmu-Chr7:5469494 | 1.40E-94 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu03g0687 | K17506 | - | csv:101207841 | 648.277 |