Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmu03g0754 | ATGAAACTGCTTGCCAAGATGTTGCTTCGTTTGATGAATAGCAGTGGAATCATTGCCGTTGGTCTCTTTGTCTTCCTGCTTTGCCTCCAATGGCGCCACCCCAAACACAAACTTCTCCCTCCCGGCTCCATGGGTTGGCCTTATATAGGCGAAACCTTCAAACTTTACACCCAAAACCCGAACTCTTTTTTCTCCATTAGGCAAAAAAGATATGGGGATGTTTTTAAGACACATATATTGGGTTGTCCTTGTGTGATGATTTCAAGTCCAAAGGCTGCAAGAGTTGTGCTTGTGAGTAAGGCTCATCTGTTCAAGCCAACTTATCCACCAAGCAAAGAGAAAATGATAGGTCCTCAAGCTTTGTTCTTCCATCAAGGCCCTTACCATTCTCACCTTAAGAAGTTGATTCAAGCTTCCTTTTTGCCCTCTGCTATTAAAGGCTCTATCTCTCAAATTGAGAACATTGTCCTCCACCTTCTCCCCTCTTGGAATAACTCCCAAATCAACACCTTGCAACAAATGAAAAGGTTTGCTTTTGATGTGGCAATGATATCAGCTTTTGGAGACCAACAAGACTTGGAAATTGAAAGAATCAAACATTTGTACCAATGCCTTGAAAAAGGCTACAATTCTATGCCTCTCGATCTTCCCGGAACTCCTTTCCGCAAAGCAATGAAGGCGAGGAAGGTGCTGAGTGAGACATTGGGGAAATTGATAGAGAAGAGACGGCGGAGCAAAGAGCATGGAGGTGGGTTGCTGGCGGTGCTACTGGGCGGCGGTGGAGAAGAGGCAGAGGATGAGAAAAAGAAGCTGAGTGATTCACAAATAGCAGATAATATAATAGGAGTAATATTTGCGGCACAAGACACGACAGCTAGTGTTTTAACATGGATTCTTAAGTACTTACACGACAATCACCATCTTCTCCAAGCTGTTCAGAAGGAGCAAGAGGCAATTTTTCAAAGGAAAGTGTGCGAAGGAAACCGTGGCCTTTCGTGGGATGATACGAGGCGCATGCCCTTCACTAGTCGGGTGATCCTAGAAACTCTAAGAAGAGCAAGTGTTGTGTCATTCACATTCAGGGAAGCAGTAGAAGAGGTTGAATTTGAAGGTTATTTAATCCCAAGAGGATGGAAAGTTCTTCCACTCTTCAGAACCATTCATCACTCTCCTGATTTCTTCCCACACCCCGAGAACTTTGATCCTTCAAGATTCGAGGTGCCACCTAGACCGAACACATATATGCCATTTGGCAATGGAGTACACTCGTGTCCAGGCAGTGAGATGGCTAAGCTTGAAATGCTTGTTCTTCTCCACCACCTCACCACCACTTACAGATGGAAAGTGGTGGGAGAGGAATCTGGAATACAATACGGTCCATTTCCTGTACCTAAAGGCCCTCCTCTCCTCTCTTTGAAGTGTGAAAGGGCAAAGGACAAAGGACAAAGCTTGGCCTTGCTAAGGCAATGGCAGAGGCGGCAACAACAAACTTTTGGATTTACCATAGCCATCCACAGCCATCCTGAAATGATTGAACATCTGATGCTTGACAATAGTGAATCTAGCAGAGCATGA | 1575 | 44.83 | MKLLAKMLLRLMNSSGIIAVGLFVFLLCLQWRHPKHKLLPPGSMGWPYIGETFKLYTQNPNSFFSIRQKRYGDVFKTHILGCPCVMISSPKAARVVLVSKAHLFKPTYPPSKEKMIGPQALFFHQGPYHSHLKKLIQASFLPSAIKGSISQIENIVLHLLPSWNNSQINTLQQMKRFAFDVAMISAFGDQQDLEIERIKHLYQCLEKGYNSMPLDLPGTPFRKAMKARKVLSETLGKLIEKRRRSKEHGGGLLAVLLGGGGEEAEDEKKKLSDSQIADNIIGVIFAAQDTTASVLTWILKYLHDNHHLLQAVQKEQEAIFQRKVCEGNRGLSWDDTRRMPFTSRVILETLRRASVVSFTFREAVEEVEFEGYLIPRGWKVLPLFRTIHHSPDFFPHPENFDPSRFEVPPRPNTYMPFGNGVHSCPGSEMAKLEMLVLLHHLTTTYRWKVVGEESGIQYGPFPVPKGPPLLSLKCERAKDKGQSLALLRQWQRRQQQTFGFTIAIHSHPEMIEHLMLDNSESSRA | 524 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 1674895 | 1685625 | - | CmPI595203_03g007540.1 | Cmu03g0754 | 411540 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmu03g0754 | 524 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 417 | 426 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cmu03g0754 | 524 | SUPERFAMILY | Cytochrome P450 | 32 | 471 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu03g0754 | 524 | FunFam | Abscisic acid 8 | 30 | 473 | - | - | |
| Cmu03g0754 | 524 | CDD | CYP90-like | 67 | 465 | - | - | |
| Cmu03g0754 | 524 | Gene3D | Cytochrome P450 | 31 | 473 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu03g0754 | 524 | PANTHER | CYTOCHROME P450 26 | 39 | 457 | - | GO:0004497(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) | |
| Cmu03g0754 | 524 | Pfam | Cytochrome P450 | 40 | 452 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu03g0754 | 524 | PRINTS | P450 superfamily signature | 286 | 303 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu03g0754 | 524 | PRINTS | P450 superfamily signature | 344 | 355 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu03g0754 | 524 | PRINTS | P450 superfamily signature | 424 | 435 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu03g0754 | 524 | PRINTS | P450 superfamily signature | 415 | 424 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu03g0754 | 524 | PRINTS | E-class P450 group I signature | 295 | 321 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu03g0754 | 524 | PRINTS | E-class P450 group I signature | 424 | 447 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu03g0754 | 524 | PRINTS | E-class P450 group I signature | 275 | 292 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu03g0754 | 524 | PRINTS | E-class P450 group I signature | 414 | 424 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu03g0754 | 524 | PRINTS | E-class P450 group I signature | 68 | 87 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu03g0754 | 524 | PRINTS | E-class P450 group I signature | 383 | 407 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu03g0754 | 524 | PRINTS | E-class P450 group I signature | 343 | 361 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmu03g0754 | Cmu-Chr3:1674895 | Cmu07g1095 | Cmu-Chr7:25998880 | 3.60E-154 | dispersed | |
| Cmu03g0754 | Cmu-Chr3:1674895 | Cmu05g2048 | Cmu-Chr5:30172088 | 2.40E-142 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmu03g0754 | K09843 | - | csv:101216531 | 843.958 |