Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu03g0756 ATGGATAATCTCCTTGAAGATTTTCCCAATTCCTGGAATAATTATCACTTCTATCCCCATCTCTCTAATGGCTTGTTCAAAGTCAATCGCGAATCCGTTGATCCCCTTCAAATTCCGGCCAAATCCCAGCAGCATCAACACCAACTCAGTAATAATTCCTCTTCTTCGCCGTCGTCGTCGAGCTCCGAAGGTGACTCGCCTGACAGCCATGACACTTCCAATACGATGCTCAAATACATCACCGAGATGCTGATGGATGAAGGAGAAGATCTCAAAACACAGCCCTGTATGCTTCTTGACTGTTTGGCTCTTCAAGCTGCTGAGAAATCTTTTTATGATGTTCTTGGCCAGAAGTATCCCCCTTCTCCAATCGGAAATGGCGATTCTTCTCAGGATTTCAGCTGTGATAGGGCTGTGAGTAATAACGGTGAAGATGAATCGGAATCTTTATATGGTAACTCCTCTGTTTTTGCCCCTTTTCAAAACTCTCTTTTGAATCAAGATTCGTTTCTTGGGATGCAATTTATTGGGCATTTTAGGCAAGGAGCTGAAGAGGCTAGCAAGTTTCTTCCTGTTAATGGAAGATTTGGAACCATTGACTTGGATAATGATTCTTCTACCTCTCTTCCCTCTAGGGCTGTTGATTTTTCTTGGGTTGGTGCTGAAAATGATGGTAGATCCAGCCTTGAAAATGGGTTATTAAGAGAGAAGAAAAACCGTCTTAGGGACGATAGTGATGAGGAGTTGAGAAGTAGTAAACAATCTGCTAACTTTGCCGATGATAATTCACTGTCTGATTTGTTTGATGAGGTTCTTCTTTGTCGGGGTGAGAGTCGGCAGTCCCCATCGTGTGGTTCCGATGAATCGTCGGAGAGCGAAGCGAATAAGAAGTCGAGAGGGAGAGGGAAAAGGAAAGGGAAGAAGACCACTCGTTCTAGGAAGCAAGAGAATAGTGTGGGAGTTGTGGATTTGTGGACATTGTTGACTCAATGTGCTCAGGCTGTTTCAAATTATGATCAAAGGACTGCAAATGAGTTGCTAAATCAGATTAGGCAGCATTCTAATCCATCTGGGGATGGAAATCAGAGATTAGCTCATTACTTTGCCAAGGGTCTCGAGACTCGGCTCGCTGCCGGGACGCCTCTGTATTTGCCCTTTGCAAGTAATGAAACCTCTGCTGCTGAGATCTTGAAAGCTTATCAGATGTTCATCAAGGCTTGCCCGTTTCGGCGGATGTCGTATTTCTATGCCAATAGAACGATTCTGAAGCTAGCTGAGAAAGTAACAACTTTGCATATTGTTGATTTTGGTATTTTGTATGGTCTCCAATGGCCTTGCTTGATTCAACGGCTCTCGCGTAGACCTGGTGGACCTCCCAAACTTCGGATCACGGGGATTGAGCTTCCCCAGCCGGGATTCCGACCTGCTGAACGTGTTGAGCAGACTGGCCGTCGCCTTGCACATTACTGCAAGAGATTCAATGTGCCATTTGAACACAAGGTCTTGGCACAGAAATGGGAATCGGTTCGATATGAGGATCTCAATCTTGATAGAGATGAACTGACTATTGTGACTTGTATGTTCCGAATGAAGAACGTACCCGACGAAACGGTGGTCGCAAACAGCCCAAGAGACAGGGTTCTAAAGTTAATCAGGAAAATCAACCCAGATCTCTTCATTCATGAAGTCACCAATGGCTCATTCAATACTCCATTCTTCAACACAAGGTTTAAGGAAGCACTCTTTTACTACTCATCGTTATTCGACATGTATGAGGCAACTGTACCTCGAGACAATCCGCAGAGGCATCTTTGTGAGAAGGAAATCCTAGGAAGAGACATCATGAATGTCATAGCGTGCGAGGGGCTCGAGAGAGTCGAAAGGCCAGAGACTTACAAGCAATGGCAAGTAAGGAACACGAGGGCTGGGTTCAAACAAGTACCATTAGACCAAGATCTGCTGAAGAGTGTGGAGAAGATAGTGAACACAGAATACCATCAGGACTTCGTGATCGATCAGGATGGGTCGTGGATGTTGCAAGGGTGGAAGGGACGGATCATCGACGCGTTATCGTGTTGGGTAGTTGCCTAA 2091 45.19 MDNLLEDFPNSWNNYHFYPHLSNGLFKVNRESVDPLQIPAKSQQHQHQLSNNSSSSPSSSSSEGDSPDSHDTSNTMLKYITEMLMDEGEDLKTQPCMLLDCLALQAAEKSFYDVLGQKYPPSPIGNGDSSQDFSCDRAVSNNGEDESESLYGNSSVFAPFQNSLLNQDSFLGMQFIGHFRQGAEEASKFLPVNGRFGTIDLDNDSSTSLPSRAVDFSWVGAENDGRSSLENGLLREKKNRLRDDSDEELRSSKQSANFADDNSLSDLFDEVLLCRGESRQSPSCGSDESSESEANKKSRGRGKRKGKKTTRSRKQENSVGVVDLWTLLTQCAQAVSNYDQRTANELLNQIRQHSNPSGDGNQRLAHYFAKGLETRLAAGTPLYLPFASNETSAAEILKAYQMFIKACPFRRMSYFYANRTILKLAEKVTTLHIVDFGILYGLQWPCLIQRLSRRPGGPPKLRITGIELPQPGFRPAERVEQTGRRLAHYCKRFNVPFEHKVLAQKWESVRYEDLNLDRDELTIVTCMFRMKNVPDETVVANSPRDRVLKLIRKINPDLFIHEVTNGSFNTPFFNTRFKEALFYYSSLFDMYEATVPRDNPQRHLCEKEILGRDIMNVIACEGLERVERPETYKQWQVRNTRAGFKQVPLDQDLLKSVEKIVNTEYHQDFVIDQDGSWMLQGWKGRIIDALSCWVVA 696
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1730486 1732576 - CmPI595203_03g007560.1 Cmu03g0756 411542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu03g0756 696 MobiDBLite consensus disorder prediction 123 150 - -
Cmu03g0756 696 MobiDBLite consensus disorder prediction 278 315 - -
Cmu03g0756 696 ProSiteProfiles GRAS family profile. 315 694 IPR005202 -
Cmu03g0756 696 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 298 693 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Cmu03g0756 696 Pfam GRAS domain family 326 693 IPR005202 -
Cmu03g0756 696 MobiDBLite consensus disorder prediction 39 73 - -
Cmu03g0756 696 MobiDBLite consensus disorder prediction 122 150 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g0756 Cmu-Chr3:1730486 Cmu10g1269 Cmu-Chr10:5590385 7.10E-57 dispersed
Cmu01g1692 Cmu-Chr1:30645553 Cmu03g0756 Cmu-Chr3:1730486 4.10E-32 transposed
Cmu02g0161 Cmu-Chr2:1595060 Cmu03g0756 Cmu-Chr3:1730486 1.00E-29 transposed
Cmu05g2138 Cmu-Chr5:30842798 Cmu03g0756 Cmu-Chr3:1730486 5.70E-39 transposed
Cmu09g0932 Cmu-Chr9:9314219 Cmu03g0756 Cmu-Chr3:1730486 2.90E-56 transposed
Cmu10g2833 Cmu-Chr10:34841085 Cmu03g0756 Cmu-Chr3:1730486 1.00E-154 wgd
Cmu02g1999 Cmu-Chr2:33752910 Cmu03g0756 Cmu-Chr3:1730486 4.30E-148 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
5864 PF03514 GRAS 4.30E-115 CL0063 Cmu TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu03g0756 K27753 - csv:101217374 1226.08